CF510103

Overview
NameCF510103
Unique NameCF510103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length367
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.648e-50
Identity = 96/122 (78.69%), Postives = 101/122 (82.79%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI G+AWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YMV QCLGAICG G VK F    Y R GGGAN +  GY KG GLGAEIIGTFVLVYTVFSATD KR+ARDSHV
Sbjct:   87 GIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHV 208          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.648e-50
Identity = 94/122 (77.05%), Postives = 103/122 (84.43%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y+V QCLGAICG G VK FQ+  Y   GGGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHV
Sbjct:   89 GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHV 210          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.765e-50
Identity = 93/122 (76.23%), Postives = 103/122 (84.43%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y++ QCLGA+CG G VK FQ+  Y   GGGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHV
Sbjct:   89 GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHV 210          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 6.223e-50
Identity = 93/122 (76.23%), Postives = 103/122 (84.43%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y++ QCLGAICG G VK FQ+  Y   GGGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHV
Sbjct:   92 GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHV 213          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 1.386e-49
Identity = 94/122 (77.05%), Postives = 101/122 (82.79%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YM  QCLGAICG G VK FQ+  Y   GGGAN +  GY KG GLGAEI+GTFVLVYTVFSATD KR+ARDSHV
Sbjct:   88 GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHV 209          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 5.268e-49
Identity = 91/122 (74.59%), Postives = 102/122 (83.61%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL L RK+SL RA+ Y+V QCLGA+CG G VKAF  + Y   GGGAN ++ GY KG GLGAE++GTFVLVYTVFSATD KR+ARDSHV
Sbjct:   94 GIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHV 215          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 9.936e-48
Identity = 94/123 (76.42%), Postives = 101/123 (82.11%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQ-KSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YMV Q LGAICG G VK F+ K  +    GGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KRSARDSHV
Sbjct:   89 GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHV 211          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 3.196e-46
Identity = 87/123 (70.73%), Postives = 102/123 (82.93%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQ-KSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            G+LGIAWAFGG+IF+LVYCTAGISGGH+NPAVTF + L R+VSL RA LY +AQC+GA+CG G  +A      Y R+GGGANELA GY+ G G+ AE++GTFVLVYTVFSATDPKR ARDSHV
Sbjct:   68 GVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHV 190          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 9.299e-46
Identity = 83/122 (68.03%), Postives = 99/122 (81.15%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            G LG+AW+FG  IF+LVYCT G+SGGHINPAVT GLF GRK+SL+R +LY+VAQCLGAI G G VK   K  Y+  GGGAN ++DGY+    LGAEI+GTF+LVYTVFSATDPKR+ARDS +
Sbjct:   81 GYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFI 202          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.028e-45
Identity = 89/122 (72.95%), Postives = 98/122 (80.33%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAW+FGGMI  LVYCTAGISG HINPAVTFGLFL RK+SL RA+ Y++ QCLGAICG G VK FQ+  Y   GG  N +A GY KG GLGAEI+GTF+LVYTVFSATD KR ARDSHV
Sbjct:   88 GIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHV 208          
The following BLAST results are available for this feature:
BLAST of CF510103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PIP1_SOLLC3.648e-5078.69Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP11_ORYSJ3.648e-5077.05Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_MAIZE4.765e-5076.23Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE6.223e-5076.23Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP13_ORYSJ1.386e-4977.05Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP16_MAIZE5.268e-4974.59Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP2_PEA9.936e-4876.42Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP28_ORYSJ3.196e-4670.73Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP27_ORYSJ9.299e-4668.03Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP11_MAIZE6.028e-4572.95Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-618 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510103 ID=CF510103; Name=CF510103; organism=Citrus sinensis; type=EST; length=367bp
GGCATTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATCTTCATTCTCGT
TTACTGCACAGCCGGTATTTCTGGTGGACATATCAACCCGGCTGTGACAT
TCGGACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCGAGCTCTTTTGTAC
ATGGTAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGC
TTTCCAAAAATCATACTACAACAGGTATGGAGGTGGGGCCAATGAGCTAG
CTGATGGATACAACAAGGGCACCGGACTGGGTGCTGAGATCATCGGTACT
TTCGTTCTTGTCTACACTGTTTTCTCTGCCACTGATCCTAAGAGGAGCGC
AAGAGACTCCCATGTTC
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