CF510103

Overview
NameCF510103
Unique NameCF510103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length367
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15
Identity = 46/113 (40.71%), Postives = 68/113 (60.18%), Query Frame = 1
Query:   13 IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 348
            I+  FG  I  +V C   ISGGHINPAVT  +   R++S+ +++ Y+ AQCLGAI G G +  +  +  +  GG G   +    + G GL  E+I TF LV+T+F++ D KR+
Sbjct:   73 ISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRT 183          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 52/118 (44.07%), Postives = 70/118 (59.32%), Query Frame = 1
Query:   13 IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTG-LGA---EIIGTFVLVYTVF-SATDPKRSA 351
            +A AFG  +F+ V   A ISGGH+NPAVTFG F+G  ++L+R +LY +AQ LG++  C  +K           GG    A G + G G L A   EI+ TF LVYTV+ +A DPK  +
Sbjct:   63 VAHAFG--LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFAT--------GGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS 170          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.918e-15
Identity = 49/121 (40.50%), Postives = 70/121 (57.85%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGA---NELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 351
            G++ IA   G  +F+ V   A ISGGH+NPAVTFGL +G ++++I  + Y +AQ LG+   C  +K          GG A   + +A G     G+  EII TF LVYTV+ +A DPK+ +
Sbjct:   55 GLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT-------GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS 168          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.918e-15
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 1
Query:    4 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 351
            +L I+ AFG  I  +      +SGGH+NPA+T  L +G ++SL+RA+ Y+VAQ +GAI G   +      Y  R     N L +    G  + AE+I TF L   VFS+TD +R++
Sbjct:   42 VLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL-APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS 156          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15
Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 1
Query:    4 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 351
            IL I+ AFG  I  L      +SGGHINPA+T  L +G ++SL+RA+ Y+ AQ +GAI G G +  +  +  N  G    N L++    G  +  E+I TF L   +FS+TD +R++
Sbjct:   42 ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGIL--YWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS 156          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15
Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 1
Query:    4 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 351
            IL IA AFG  I  L      +SGGHINPA+T  L +G ++SL+RA  Y+ AQ +GAI G G +  +  +  N  G    N L +   +G  +  E+I TF L   +F++TD +R++
Sbjct:   42 ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS 156          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.977e-15
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 351
            G++ +A A    +F+ V   A +SGGH+NPAVT GL +G  ++++  L Y +AQCLG+   C  +K       N      + +A G +   G+  EII TF LVYTV+ +A DPK+ +
Sbjct:   55 GLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVT----NGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS 168          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.977e-15
Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 1
Query:    4 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 351
            IL I+ AFG  I  L      +SGGHINPA+T  L +G ++SL+RA+ Y+ AQ +GAI G G +  +  +  N  G    N L +    G  +  E+I TF L   +FS+TD +R++
Sbjct:   42 ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL--YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS 156          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.500e-15
Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSA-TDPKRSA 351
            G++ +A A    +F  V     +SGGH+NPAVTFG  +G +V+ IRA+ Y +AQ LGAI  C  ++       N        LA G     GL  EII TF LVY V+S   DPKR +
Sbjct:   65 GLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTT----NGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS 178          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.489e-15
Identity = 48/118 (40.68%), Postives = 67/118 (56.78%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRSA 351
            G++ +A A    +F  V     +SGGH+NPAVTF   +G ++S+IRA+ Y VAQ +GAI  C  ++       N        +A G ++  GL  EII TF LVY V+S A DPKR +
Sbjct:   65 GLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLAT----NGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS 178          
The following BLAST results are available for this feature:
BLAST of CF510103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
AQP4_BOVIN1.711e-1540.71Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
TIP11_ARATH2.234e-1544.07Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP21_ARATH2.918e-1540.50Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQP5_SHEEP2.918e-1538.79Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_MOUSE3.811e-1539.32Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP5_HUMAN3.811e-1539.32Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP_ANTMA4.977e-1538.14Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
AQP5_RAT4.977e-1539.32Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
TIP31_ARATH6.500e-1541.53Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP32_ARATH8.489e-1540.68Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-618 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510103 ID=CF510103; Name=CF510103; organism=Citrus sinensis; type=EST; length=367bp
GGCATTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATCTTCATTCTCGT
TTACTGCACAGCCGGTATTTCTGGTGGACATATCAACCCGGCTGTGACAT
TCGGACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCGAGCTCTTTTGTAC
ATGGTAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGC
TTTCCAAAAATCATACTACAACAGGTATGGAGGTGGGGCCAATGAGCTAG
CTGATGGATACAACAAGGGCACCGGACTGGGTGCTGAGATCATCGGTACT
TTCGTTCTTGTCTACACTGTTTTCTCTGCCACTGATCCTAAGAGGAGCGC
AAGAGACTCCCATGTTC
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