CF510103

Overview
NameCF510103
Unique NameCF510103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length367
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.503e-14
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 351
            G++ +A A    +F+ V   A ISGGH+NPAVT GL +G  ++++    Y +AQ LG+   C  +K       N      + +A G N   G+  EII TF LVYTV+ +A DPK+ +
Sbjct:   55 GLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVT----NGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS 168          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14
Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKR 345
            G++  + A    +F+ V   A ISGGH+NPAV FG F+G  ++L+R ++Y++AQ LG+I     +     S    +G     L++G   G  L  EI+ TF LVYTV+ +A DPK+
Sbjct:   57 GLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK 166          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.386e-14
Identity = 49/121 (40.50%), Postives = 67/121 (55.37%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC---GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 351
            G++ IA A    +F+ V   A  SGGH+NPAVTFGL +G  ++++  L Y VAQ LGA   C    FV   +    +   GG  EL        G+  EI+ TF LVYTV+ +A DPK+ +
Sbjct:   55 GLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTEL-------EGVVFEIVITFALVYTVYATAADPKKGS 168          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13
Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 1
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV-------KAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 351
            G+LG+A+AFG  +  + +    ISG H+NPAV+FGL +G +      L Y++AQ +GAI   G +         F+ S      G A+    GY  G G  +E++ T + +  +  ATD +  A
Sbjct:   36 GVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPA 159          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.731e-13
Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = 1
Query:    4 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 354
            +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA+ YM AQ LGA+ G   + +   +   R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:   41 VLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAV-RGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.731e-13
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 1
Query:    4 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 354
            +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA+ YMVAQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:   41 VLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.731e-13
Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 1
Query:   13 IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 348
            IA+ FG ++  L      +SG HINPAVT GL +   +S+++   Y+V+QC+GAI G   +KA   S  +  GG G   +      G G+  E + TF+LV+ V    D +RS
Sbjct:   58 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPS--DVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRS 168          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.084e-13
Identity = 42/114 (36.84%), Postives = 61/114 (53.51%), Query Frame = 1
Query:    4 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 345
            ++ IA  FG +I  +V C   +SG HINPAVT GL +   +S+++A+ Y++ QC+GAI G   +K    + + R       LA G     G   E   TFVL+  V S  D +R
Sbjct:   58 VVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEF-RGTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRR 170          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.946e-13
Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = 1
Query:    4 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 354
            +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA+ Y+VAQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:   41 VLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.946e-13
Identity = 43/117 (36.75%), Postives = 59/117 (50.43%), Query Frame = 1
Query:    4 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 354
            +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  YM AQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:   41 VLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGR 156          
The following BLAST results are available for this feature:
BLAST of CF510103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
TIP1_TOBAC5.503e-1438.14Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP1_MEDSA7.187e-1438.79Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP22_MAIZE9.386e-1440.50Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
AQPZ_PSEPK2.091e-1333.06Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
MIP_RABIT2.731e-1336.75Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
MIP_BOVIN2.731e-1337.61Lens fiber major intrinsic protein OS=Bos taurus G... [more]
AQP_AEDAE2.731e-1337.17Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP_CICVR6.084e-1336.84Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
MIP_SHEEP7.946e-1336.75Lens fiber major intrinsic protein OS=Ovis aries G... [more]
MIP_CANFA7.946e-1336.75Lens fiber major intrinsic protein OS=Canis famili... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-618 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510103 ID=CF510103; Name=CF510103; organism=Citrus sinensis; type=EST; length=367bp
GGCATTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATCTTCATTCTCGT
TTACTGCACAGCCGGTATTTCTGGTGGACATATCAACCCGGCTGTGACAT
TCGGACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCGAGCTCTTTTGTAC
ATGGTAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGC
TTTCCAAAAATCATACTACAACAGGTATGGAGGTGGGGCCAATGAGCTAG
CTGATGGATACAACAAGGGCACCGGACTGGGTGCTGAGATCATCGGTACT
TTCGTTCTTGTCTACACTGTTTTCTCTGCCACTGATCCTAAGAGGAGCGC
AAGAGACTCCCATGTTC
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