CF510133

Overview
NameCF510133
Unique NameCF510133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length311
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_SALCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella choleraesuis GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.312e-12
Identity = 44/101 (43.56%), Postives = 56/101 (55.45%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKA-AALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD E+KSW AFA QK  E+  L  AL   +       +A  QA R+ S RV N  V+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQ
Sbjct:  337 RLDTEVKSWFAFALQKCGELALLRDALNSGETAALEEWSAPIQA-RRHSRRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQ 436          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_SALA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella agona (strain SL483) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.312e-12
Identity = 44/101 (43.56%), Postives = 56/101 (55.45%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKA-AALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD E+KSW AFA QK  E+  L  AL   +       +A  QA R+ S RV N  V+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQ
Sbjct:  337 RLDTEVKSWFAFALQKCGELALLRDALNSGETAALEEWSAPIQA-RRHSRRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQ 436          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_PHOLL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=metE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12
Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKD---EGFFSANAAAQASRKSSPRVTNERV-QKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD E+KSW AFA QK  E+  L  AL  Q D   +    A +A   +R+ S RV N+ V ++ AA+   D  R      R + Q+++ NLP+ PTTTIGSFPQ
Sbjct:  338 LDAEVKSWFAFALQKCEELALLTAAL-NQPDGSKQAELDAYSAPIRARRESKRVNNQAVTERLAAINPQDSERNQPYLQRAEIQRQRYNLPLWPTTTIGSFPQ 439          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_ECOL5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.151e-12
Identity = 42/101 (41.58%), Postives = 57/101 (56.44%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKA-AALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD E+KSW AFA QK  E+ AL + +    D    +  +A   +R+ S RV N  V+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQ
Sbjct:  337 RLDAEVKSWFAFALQKCHEL-ALLRDVLNSGDTAALAEWSAPIQARRHSTRVHNPAVEKRLAAITAQDSQRTNVYEVRAEAQRARFKLPAWPTTTIGSFPQ 436          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_CANAL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Candida albicans GN=MET6 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.151e-12
Identity = 41/101 (40.59%), Postives = 56/101 (55.45%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            KLD  IK W +FA QK+ EV  +AK ++G+       ANAA+  +R  S    + +VQ +   +  +   R      RL  Q+ K NLP+ PTTTIGSFPQ
Sbjct:  351 KLDAVIKDWFSFATQKLDEVVVIAKNVSGEDVSKQLEANAASIKARSESSITNDPKVQERLTTINEALATRKAAFPERLTEQKAKYNLPLFPTTTIGSFPQ 451          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_BURPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metE PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.151e-12
Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKD-EGFFSANAAAQASRKSSPRVTNERVQK-AAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            KLD ++KSWLAFA +K+ EV  LA AL      E   +A   A  +R+ S  V N  VQK  AA+  +   R +  + R   Q++ L LP+LPTTTIGSFPQ
Sbjct:  335 KLDADLKSWLAFATEKLGEVATLALALRDPAAAEATLAAADRALDARRHSSTVVNALVQKRVAAVSSAMADRQSPFAERNRLQREALGLPLLPTTTIGSFPQ 436          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_SALTI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella typhi GN=metE PE=3 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 6.727e-12
Identity = 43/101 (42.57%), Postives = 55/101 (54.46%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKA-AALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD E+KSW AFA QK  E+  L  AL   +       +   QA R+ S RV N  V+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQ
Sbjct:  337 RLDTEVKSWFAFALQKCGELALLRDALNSGETAALEEWSVPIQA-RRHSHRVHNAAVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQ 436          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_SALAR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=metE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.727e-12
Identity = 44/101 (43.56%), Postives = 55/101 (54.46%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKA-AALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD E+KSW AFA QK  E+  L  AL           +A  QA R+ S RV N  V+K  AA+   D +R      R +AQ+ +  LP  PTTTIGSFPQ
Sbjct:  337 RLDAEVKSWFAFALQKCGELALLRDALNSGDTAAVTEWSAPIQA-RRHSTRVHNVGVEKRLAAITAQDSQRENPYEVRAEAQRARFKLPAWPTTTIGSFPQ 436          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_AERS4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Aeromonas salmonicida (strain A449) GN=metE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.727e-12
Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = 2
Query:    2 NKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            ++LD + +SW AFA QK  E+  L+  L G  D    +A +     R+S  RV  + VQ + A+L  SD  R +    R  AQ+  L LP+LPTTTIGSFPQ
Sbjct:  335 HELDPQTRSWFAFALQKCYELGLLSDYLDGG-DLDKITAYSQPLVDRESDSRVHKKAVQSRLASLTNSDFDRQSAYPVRAQAQRNDLKLPLLPTTTIGSFPQ 435          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_PARL1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=metE PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.786e-12
Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD E+KSWLAFA +K+ E+  LA+ +   +       + NAA   +R++SPR+ N  V+ +   +     RR    + R   QQK+  LP LPTTTIGSFPQ
Sbjct:  342 LDPELKSWLAFAEEKLGELAVLARGVKEGRTSISTELAENAALFEARRNSPRIHNPAVRARVRDIDPHADRRGRPFADRQSIQQKRFGLPKLPTTTIGSFPQ 443          
The following BLAST results are available for this feature:
BLAST of CF510133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
METE_SALCH2.312e-1243.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALA42.312e-1243.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOLL3.944e-1242.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOL55.151e-1241.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CANAL5.151e-1240.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPP5.151e-1245.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALTI6.727e-1242.575-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALAR6.727e-1243.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_AERS46.727e-1242.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PARL18.786e-1241.185-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-648 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510133 ID=CF510133; Name=CF510133; organism=Citrus sinensis; type=EST; length=311bp
GAACAAACTCGACGACGAAATCAAGTCATGGCTGGCATTTGCTGCCCAGA
AAGTTGTTGAAGTGAATGCATTGGCCAAGGCTTTGGCTGGCCAAAAGGAT
GAGGGATTCTTCTCTGCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTC
CCCGAGAGTGACCAATGAGAGAGTTCAAAAGGCTGCTGCTTTGAAAGGAT
CAGACCACAGACGTGCTACAAATGTTAGTGCTAGATTAGATGCTCAACAG
AAGAAGCTCAATCTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCC
ACAAAACCATT
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