CF510133

Overview
NameCF510133
Unique NameCF510133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length311
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_DESVM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.556e-11
Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKA--LAGQKDEGFFSA----NAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD E+  WLAFA QK  EV  +A    L G+ D    +A    N AA A+R +SP + +  V  +A  +      RAT  +AR+ AQ+  L LP+LP TTIGSFPQ
Sbjct:  357 LDPEVAQWLAFARQKCAEVRLVADMCDLNGRADAPETAAALARNRAALAARAASPVIHDPAVAVRAGTVTPEMGWRATPYTARIAAQRAALRLPVLPATTIGSFPQ 462          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_SODGM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Sodalis glossinidius (strain morsitans) GN=metE PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.361e-11
Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKAL-----AGQKDEGFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD+E+KSW AFA QK  E+  L  AL     A Q   G +SA   A   R+ S RV N  V+ +   +  +D +R    +AR   Q+ +  LP  PTTTIGSFPQ
Sbjct:  337 QLDEEVKSWFAFALQKCAELGLLRAALNAPDEANQARLGEYSAPIRA---RRHSSRVHNPEVKARLEKITAADSQRQQPYAARAALQRARFKLPAWPTTTIGSFPQ 439          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_STRAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces avermitilis GN=metE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.695e-11
Identity = 42/99 (42.42%), Postives = 54/99 (54.55%), Query Frame = 2
Query:   17 EIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            ++  WLAFA QK  E+  LAK L    D      +AN A   SR  S    +  V+ + AA   +D RR+     R  AQ+ +L LP+LPTTTIGSFPQ
Sbjct:  353 QVLRWLAFARQKTAEIVTLAKGLGHGTDAIAAQLAANRADLVSRADSALTRDPAVRSRTAATTDADARRSGPYPERAAAQRARLGLPLLPTTTIGSFPQ 451          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_BAUCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.438e-11
Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQA---SRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            ++D E+KSW AF  QK  E+  L  AL    D  + +  A   A   +R++S +V N +V+ +   +  +  +R  +   R++ Q+ + NLPILPTTTIGSFPQ
Sbjct:  338 RMDPEVKSWFAFTIQKCNELKLLCNALNRLDDTKYQAILADYSAPLWARQTSEKVHNRQVKIRTEQITENHSQRQQHYLDRINVQRARFNLPILPTTTIGSFPQ 441          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_VIBPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio parahaemolyticus GN=metE PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.714e-11
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQ--ASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +L +E+KSW AFA QKV EV  L +AL G ++    + +  +Q   +RK++  V   +VQ +   +  S   R+   + R   Q + L LP+LPTTTIGSFPQ
Sbjct:  340 ELSEEVKSWFAFAKQKVTEVALLGRALDGDQN-AILACDTYSQPIKARKTATHVNKPQVQVRLNNITASLAERSAPYAERAAHQAEVLGLPLLPTTTIGSFPQ 441          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_VIBHA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi GN=metE PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.714e-11
Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQ--ASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            L DE+KSW AFA QKV EV  L +AL G  +      +  +Q    RK++  V    VQ +  ++  S   R+   + R   Q + L LP+LPTTTIGSFPQ
Sbjct:  341 LSDEVKSWFAFAKQKVTEVALLGRALDGDHN-AILVCDTYSQPIKDRKTAAHVNKPHVQARLNSISASLTERSAPYAERAAHQAEVLGLPLLPTTTIGSFPQ 441          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_ACTP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metE PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.714e-11
Identity = 40/99 (40.40%), Postives = 53/99 (53.54%), Query Frame = 2
Query:   17 EIKSWLAFAAQKVVEVNALAKALAGQKD---EGFFSANAAAQASRKSSPRVTNERVQKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            E+  WLAF  QKV E+  L +AL   +D   E    +  AA A   S+     E  Q+ A L  +  +R +  + R+  Q K LNLP+LPTT IGSFPQ
Sbjct:  339 ELYRWLAFTLQKVAELQVLKQALNAGRDAVTEQLNDSQTAADARANSNVIHKAEVAQRLANLPANADKRQSPFAERIKLQNKWLNLPLLPTTNIGSFPQ 437          
The following BLAST results are available for this feature:
BLAST of CF510133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
METE_DESVM2.556e-1143.405-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SODGM4.361e-1141.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRAW5.695e-1142.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BAUCH7.438e-1137.505-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBPA9.714e-1139.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHA9.714e-1141.185-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP29.714e-1140.405-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-648 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510133 ID=CF510133; Name=CF510133; organism=Citrus sinensis; type=EST; length=311bp
GAACAAACTCGACGACGAAATCAAGTCATGGCTGGCATTTGCTGCCCAGA
AAGTTGTTGAAGTGAATGCATTGGCCAAGGCTTTGGCTGGCCAAAAGGAT
GAGGGATTCTTCTCTGCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTC
CCCGAGAGTGACCAATGAGAGAGTTCAAAAGGCTGCTGCTTTGAAAGGAT
CAGACCACAGACGTGCTACAAATGTTAGTGCTAGATTAGATGCTCAACAG
AAGAAGCTCAATCTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCC
ACAAAACCATT
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