CF510133

Overview
NameCF510133
Unique NameCF510133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length311
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_PSEA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=metE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.679e-16
Identity = 50/103 (48.54%), Postives = 64/103 (62.14%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSA---NAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD E+KSWLAFA QK  EV  LA+A    +     +A   + A QASR SSPR+    VQ + AA+K SD +R +  + R+  Q+  L+LP  PTTTIGSFPQ
Sbjct:  343 LDAELKSWLAFAVQKCREVAVLARAATEPEAAEVLAALEESRAVQASRASSPRIHKPAVQARLAAIKASDAQRRSPFAERIARQRAGLDLPAFPTTTIGSFPQ 445          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_BURVG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=metE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 51/103 (49.51%), Postives = 62/103 (60.19%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQKAAA-LKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            KLD EI+SWLAFA QK+ E+  LA AL   +D      + NAAA  SR+ SPRV N  V+ A A +      RA+    R  AQ  +L LP+ PTTTIGSFPQ
Sbjct:  343 KLDAEIRSWLAFALQKLAELKLLATALNQGRDTVADALAENAAAIESRRRSPRVHNPAVKSAVARIDARLGNRASAYPQRAAAQSARLKLPLFPTTTIGSFPQ 445          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_CORGB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum (strain R) GN=metE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15
Identity = 45/99 (45.45%), Postives = 59/99 (59.60%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            ++ E++ WLAF ++K+ EV  LA ALAG  D   F A +AA ASR++SPR      +     +GS + R T        Q+K L LP LPTTTIGSFPQ
Sbjct:  332 IEPEVRDWLAFGSEKITEVKLLADALAGNIDAAAFDAASAAIASRRTSPRTAPITQELPGRSRGSFNTRVT-------LQEKSLELPALPTTTIGSFPQ 423          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_PSEPW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas putida (strain W619) GN=metE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15
Identity = 51/106 (48.11%), Postives = 64/106 (60.38%), Query Frame = 2
Query:    2 NKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSA----NAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            ++LD E+KSWLAFA QK  EV  LAKA+  Q D    +A    + A QA R SSPR+    VQ +  A+K  D +R +    R+  Q+  LNLP  PTTTIGSFPQ
Sbjct:  344 DQLDTELKSWLAFAVQKCQEVAVLAKAV-NQPDAAEVAAALARSRAIQAGRASSPRIHKPAVQARVHAIKPGDSQRQSAFGQRIAKQRAGLNLPAYPTTTIGSFPQ 448          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_CORGL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum GN=metE PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            ++ E++ WLAF ++K+ EV  LA ALAG  D   F A +AA ASR++SPR      +     +GS   R T        Q+K L LP LPTTTIGSFPQ
Sbjct:  332 IEPEVRDWLAFGSEKITEVKLLADALAGNIDAAAFDAASAAIASRRTSPRTAPITQELPGRSRGSFDTRVT-------LQEKSLELPALPTTTIGSFPQ 423          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_PSEF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15
Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 2
Query:    2 NKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSA---NAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            ++LD E+KSWLAFA QK  EV  LA+A+   +      A   + A QASR +SPR+    VQ + AA+   D +R +  + R+  Q+  L+LP+ PTTTIGSFPQ
Sbjct:  339 DQLDAELKSWLAFAVQKCQEVAVLAQAVNQPQARAVLKALEQSRAVQASRAASPRIHKPAVQARVAAITTKDSQRRSAFTQRIAKQRAGLDLPLFPTTTIGSFPQ 443          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_CHRSD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15
Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQ---KDEGFFSANAAAQASRKSSPRVTNERV-QKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD E+KSWLAFA QK+ E+  LA  L G+   +D     A  +A  +R+ SPR+    V ++ AA+   D  RA+  + R  AQ + L+LP+ PTTTIGSFPQ
Sbjct:  340 LDAELKSWLAFARQKLDEIVTLAHLLDGRATPEDTARLEAATSALDARRQSPRIHKPAVGERLAAVSADDAERASPYATRAKAQHRHLDLPLFPTTTIGSFPQ 442          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_YERPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERV-QKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V Q+ AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQ
Sbjct:  337 RLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQ 439          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_YERPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis (strain Pestoides F) GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERV-QKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V Q+ AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQ
Sbjct:  337 RLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQ 439          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_YERPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERV-QKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V Q+ AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQ
Sbjct:  337 RLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQ 439          
The following BLAST results are available for this feature:
BLAST of CF510133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
METE_PSEA87.679e-1648.545-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURVG1.003e-1549.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGB1.310e-1545.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEPW1.711e-1548.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGL2.234e-1545.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEF53.811e-1544.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRSD3.811e-1544.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPS4.978e-1545.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPP4.978e-1545.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPN4.978e-1545.635-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-648 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510133 ID=CF510133; Name=CF510133; organism=Citrus sinensis; type=EST; length=311bp
GAACAAACTCGACGACGAAATCAAGTCATGGCTGGCATTTGCTGCCCAGA
AAGTTGTTGAAGTGAATGCATTGGCCAAGGCTTTGGCTGGCCAAAAGGAT
GAGGGATTCTTCTCTGCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTC
CCCGAGAGTGACCAATGAGAGAGTTCAAAAGGCTGCTGCTTTGAAAGGAT
CAGACCACAGACGTGCTACAAATGTTAGTGCTAGATTAGATGCTCAACAG
AAGAAGCTCAATCTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCC
ACAAAACCATT
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