CF510133

Overview
NameCF510133
Unique NameCF510133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length311
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_YERPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERV-QKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V Q+ AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQ
Sbjct:  337 RLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQ 439          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_YERPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERV-QKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V Q+ AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQ
Sbjct:  337 RLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQ 439          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_YERP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERV-QKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V Q+ AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQ
Sbjct:  337 RLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQ 439          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_CAUCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Caulobacter crescentus GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.978e-15
Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRK--SSPRVTNERV-QKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD EI+ WLAFA QKV  +  LA+AL G +     +  A+AQA+R   +SPR+ + +V ++ AA+     RR +    R +AQ+ +LNLP LPTTTIGSFPQ
Sbjct:  359 LDPEIRQWLAFAVQKVEALAVLAQALNGGRASVAAALEASAQAARARATSPRIHDPKVAERLAAVTPDMTRRRSPYDQRREAQRARLNLPPLPTTTIGSFPQ 460          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_SACD2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metE PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 50/106 (47.17%), Postives = 64/106 (60.38%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSA------NAAAQASRKSSPRVTNERVQKAAA-LKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD +IK+WLAFA QK+ E+N L +AL    D G  S       NA A A+RK+S +V N +VQ     +  S   R +  + R++ QQ K NLP LPTTTIGSFPQ
Sbjct:  345 LDADIKNWLAFAKQKLQELNILQRAL----DNGETSVAEALVHNAGAIAARKASAKVNNAKVQSLVNNISPSLSERESPFATRIEKQQAKYNLPTLPTTTIGSFPQ 446          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_PSEA7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=metE PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 2
Query:    2 NKLDDEIKSWLAFAAQKVVEVNALAKALA---GQKDEGFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            ++LD+E++SWLAFA QK  EV  LA+AL      +    F  +   +ASR+ S R+    VQ + AA++  D RRA+  + R   Q+ +L LP  PTTTIGSFPQ
Sbjct:  339 DQLDEELQSWLAFAVQKCEEVAILARALVEPEAPEVRQAFEVSRRVEASRRRSTRIHKREVQARLAAVRPQDSRRASAFAERAVQQRARLELPAFPTTTIGSFPQ 443          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_RHOPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris GN=metE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.491e-15
Identity = 44/102 (43.14%), Postives = 69/102 (67.65%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD ++KSWL+F+ QK+ E++ L++AL+G +   +   SA+A A A+R+ SP+V +  V  +AAA+  +  +R +  +AR   Q ++L LP  PTTTIGSFPQ
Sbjct:  367 LDPDLKSWLSFSLQKMGELSTLSRALSGDRAAVQDQLSASAKAAATRRKSPKVHDMAVSSRAAAVTPAMTQRNSGFAARATLQHQRLQLPAFPTTTIGSFPQ 468          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_PSESM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas syringae pv. tomato GN=metE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.491e-15
Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 2
Query:    2 NKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAA---QASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            ++LD E+K WLAFA QK  E+  L+ AL   +      A A +   QASR  S RV N +VQ + A++  +DH+R +  + R+  Q+++L LP  PTTTIGSFPQ
Sbjct:  346 DRLDPELKGWLAFAVQKSREIAILSHALNDPEATEVVEALAQSCEIQASRAQSSRVHNPQVQARLASVTAADHQRRSAFAERITVQRERLKLPAFPTTTIGSFPQ 450          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_RHOPT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 44/102 (43.14%), Postives = 68/102 (66.67%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD ++KSWL+F+ QK+ E++ L+ AL+G +   +   SA+A A A+R+ SP+V +  V  +AAA+  +  +R +  +AR   Q ++L LP  PTTTIGSFPQ
Sbjct:  367 LDPDLKSWLSFSLQKMGELSTLSGALSGDRAAVQDQLSASAKAAATRRKSPKVHDMAVSSRAAAVTPAMTQRNSGFAARATLQHQRLQLPAFPTTTIGSFPQ 468          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_PROMH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Proteus mirabilis (strain HI4320) GN=metE PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 47/104 (45.19%), Postives = 59/104 (56.73%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKAL---AGQKDEGFFSANAAAQASRKSSPRVTNERV-QKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            KLDDE+KSW AFA QK  EV  LAKAL    G+ DE     +A  +  R+ S RV N +V  +  A+   D  R +    R   Q+ + N P+ PTTTIGSFPQ
Sbjct:  337 KLDDEVKSWFAFAVQKCAEVALLAKALNAPEGEYDEQLAQYSAPIR-QREHSSRVHNAKVAARLQAINAQDGERTSPYQQRAKVQRARFNFPLWPTTTIGSFPQ 439          
The following BLAST results are available for this feature:
BLAST of CF510133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
METE_YERPE4.978e-1545.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPA4.978e-1545.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERP34.978e-1545.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAUCR4.978e-1547.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SACD26.501e-1547.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA76.501e-1543.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOPA8.491e-1543.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSESM8.491e-1543.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOPT2.470e-1443.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PROMH2.470e-1445.195-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-648 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510133 ID=CF510133; Name=CF510133; organism=Citrus sinensis; type=EST; length=311bp
GAACAAACTCGACGACGAAATCAAGTCATGGCTGGCATTTGCTGCCCAGA
AAGTTGTTGAAGTGAATGCATTGGCCAAGGCTTTGGCTGGCCAAAAGGAT
GAGGGATTCTTCTCTGCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTC
CCCGAGAGTGACCAATGAGAGAGTTCAAAAGGCTGCTGCTTTGAAAGGAT
CAGACCACAGACGTGCTACAAATGTTAGTGCTAGATTAGATGCTCAACAG
AAGAAGCTCAATCTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCC
ACAAAACCATT
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