CF510133

Overview
NameCF510133
Unique NameCF510133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length311
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_CHRVO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromobacterium violaceum GN=metE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13
Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERV-QKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD E+K+WLAFA QK+ E+  L + L   +    G  S +  A+  R++SPR+ +  V ++ AAL     RRA+    R + QQ  L LP LPTTTIGSFPQ
Sbjct:  337 LDPELKNWLAFAVQKLNELKTLKRGLEHGRSAIAGELSGSDFAREQRRASPRIHDPAVARRLAALPEGTDRRASPYPIRAERQQAWLKLPPLPTTTIGSFPQ 438          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_PSEMY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas mendocina (strain ymp) GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.731e-13
Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = 2
Query:    2 NKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSA---NAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            ++LD E+KSWLAFA QK  EV  L +AL    D    +A   +   +A+R +S R+    VQ + AA++    +R +  + R+  Q++ L LP+LPTTTIGSFPQ
Sbjct:  344 DQLDAELKSWLAFAVQKCQEVALLGRALEAPDDASVQAALEQSRVVRAARAASTRIHKPEVQARLAAIRPRHAQRQSPFAERIAQQRECLQLPLLPTTTIGSFPQ 448          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_NITWN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.731e-13
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD E+KSWLAF+ QK+ E+  L +ALA  +        A+A A A+RK+SP+V + +V+ + AA+     RR +  + R   Q+++  LP  PTTTIGSFPQ
Sbjct:  355 LDAELKSWLAFSVQKMGELATLGEALAKGRASVADALKASADAAAARKASPKVHDAKVEGRIAAVTSDMARRKSAFAERAKLQRERFGLPPFPTTTIGSFPQ 456          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_MARAV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.731e-13
Identity = 45/103 (43.69%), Postives = 63/103 (61.17%), Query Frame = 2
Query:    5 KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAALKGSD-HRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            +LD +I++WLAFA QK+ E+  LA+AL   +       + N  A  SR++S RVTN  V+KA A    +   R +    R+  Q+++LNLP  PTTTIGSFPQ
Sbjct:  338 ELDSDIRNWLAFAVQKLDELQILARALNEGRSSVRAELADNQLAIDSRRNSHRVTNPEVRKAVASVTPELGNRHSPYPQRIARQRERLNLPAFPTTTIGSFPQ 440          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_COREF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium efficiens GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.731e-13
Identity = 46/99 (46.46%), Postives = 59/99 (59.60%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            L+ E++ WLAF  +KV EV ALA ALAG+ +E  F A AAA A R+ S         + A +  +D  R+     R  AQ + L+LP LPTTTIGSFPQ
Sbjct:  335 LNPEVREWLAFGEEKVREVVALADALAGEINESLFDAAAAALADRRHSVLT----AARDADITDADRSRSP-FEVRAAAQDEALDLPPLPTTTIGSFPQ 428          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_THIDA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13
Identity = 47/102 (46.08%), Postives = 59/102 (57.84%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQKA-AALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LD EIKSWLAFA QK+ E+  L  AL   +D      +AN AA  +R++SPRV +  V+ A AA+      R +  + R   Q   L LP  PTTTIGSFPQ
Sbjct:  346 LDGEIKSWLAFAKQKLDELRVLVAALNHGRDTVSAELAANRAACDARRNSPRVNDPAVKAAVAAITPQSGARQSPYAVRAAKQAAHLRLPRFPTTTIGSFPQ 447          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_MYCTU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LDD ++SWLAF A+KV EV  LA+AL    D      +++ AA ASRK  PR+ N +++ +  A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQ
Sbjct:  342 LDDALRSWLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQ 442          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_MYCTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LDD ++SWLAF A+KV EV  LA+AL    D      +++ AA ASRK  PR+ N +++ +  A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQ
Sbjct:  342 LDDALRSWLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQ 442          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_MYCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LDD ++SWLAF A+KV EV  LA+AL    D      +++ AA ASRK  PR+ N +++ +  A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQ
Sbjct:  342 LDDALRSWLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQ 442          
BLAST of CF510133 vs. ExPASy Swiss-Prot
Match: METE_MYCBO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 2
Query:    8 LDDEIKSWLAFAAQKVVEVNALAKALAGQKD--EGFFSANAAAQASRKSSPRVTNERVQ-KAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQ 304
            LDD ++SWLAF A+KV EV  LA+AL    D      +++ AA ASRK  PR+ N +++ +  A+  S   R  N + R  +Q  +L+LP LPTTTIGS+PQ
Sbjct:  342 LDDALRSWLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPRLHNGQIRARIEAIVASGAHRG-NAAQRRASQDARLHLPPLPTTTIGSYPQ 442          
The following BLAST results are available for this feature:
BLAST of CF510133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
METE_CHRVO2.091e-1344.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEMY2.731e-1341.905-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITWN2.731e-1343.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MARAV2.731e-1343.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COREF2.731e-1346.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THIDA3.567e-1346.085-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTU3.567e-1345.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTA3.567e-1345.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBP3.567e-1345.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBO3.567e-1345.105-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-648 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510133 ID=CF510133; Name=CF510133; organism=Citrus sinensis; type=EST; length=311bp
GAACAAACTCGACGACGAAATCAAGTCATGGCTGGCATTTGCTGCCCAGA
AAGTTGTTGAAGTGAATGCATTGGCCAAGGCTTTGGCTGGCCAAAAGGAT
GAGGGATTCTTCTCTGCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTC
CCCGAGAGTGACCAATGAGAGAGTTCAAAAGGCTGCTGCTTTGAAAGGAT
CAGACCACAGACGTGCTACAAATGTTAGTGCTAGATTAGATGCTCAACAG
AAGAAGCTCAATCTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCC
ACAAAACCATT
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