CF510144

Overview
NameCF510144
Unique NameCF510144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length374
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 1.282e-63
Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQDIVVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALFG
Sbjct:   93 ARQDIVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.674e-63
Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQD+VVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTK +GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALFG
Sbjct:   93 ARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.674e-63
Identity = 117/124 (94.35%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKL+GL+PSVKRFMMYQQGCFAGGTV+RLAKDLAENNKGARVLVVCSEITAVTFRGP+D HLDSLVGQALFG
Sbjct:   93 ARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLQPSVKRFMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFRGPSDAHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHSE_IPONI (Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.674e-63
Identity = 117/124 (94.35%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKL+GL+PSVKRFMMYQQGCFAGGTV+RLAKDLAENNKGARVLVVCSEITAVTFRGP+D HLDSLVGQALFG
Sbjct:   93 ARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLQPSVKRFMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFRGPSDAHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 2.186e-63
Identity = 117/124 (94.35%), Postives = 123/124 (99.19%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQD+VVVEVP+LGKEAA+KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN GARVLVVCSEITAVTFRGP+D+HLDSLVGQALFG
Sbjct:   98 ARQDLVVVEVPRLGKEAASKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSDSHLDSLVGQALFG 221
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 2.186e-63
Identity = 116/124 (93.55%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQD+VVVE+PKLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALFG
Sbjct:   93 ARQDMVVVEIPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 2.856e-63
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPG DYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALFG
Sbjct:   93 ARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 2.856e-63
Identity = 116/124 (93.55%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTV+RLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDS+VGQALFG
Sbjct:   93 ARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSMVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 2.856e-63
Identity = 118/123 (95.93%), Postives = 120/123 (97.56%), Query Frame = 2 
Query:    5 RQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            RQD+VVVEVPKLGKEAA KAIKEWG PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALFG
Sbjct:   97 RQDLVVVEVPKLGKEAAMKAIKEWGHPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFG 219
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 3.729e-63
Identity = 117/123 (95.12%), Postives = 121/123 (98.37%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALF 370
            ARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF
Sbjct:   98 ARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 220
The following BLAST results are available for this feature:
BLAST of CF510144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSY_VIGUN1.282e-6395.16Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHSY_PUELO1.674e-6395.16Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHSE_IPOPU1.674e-6394.35Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHSE_IPONI1.674e-6394.35Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV... [more]
CHSY_PETCR2.186e-6394.35Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHS1_CASGL2.186e-6393.55Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]
CHSA_PETHY2.856e-6395.16Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHS2_SOLLC2.856e-6393.55Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHS1_GERHY2.856e-6395.93Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=... [more]
CHSY_CARAN3.729e-6395.12Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-659 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510144 ID=CF510144; Name=CF510144; organism=Citrus sinensis; type=EST; length=374bp
CGCACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAGCTCGGGAAAGAAG
CTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTAAGATCACC
CACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGCGCCGACTA
CCAGCTCACCAAACTGATCGGCCTGCGCCCCTCCGTCAAGCGCTTCATGA
TGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCTTCGCCTCGCTAAA
GACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGA
GATCACGGCAGTCACTTTCCGCGGCCCTGCCGATACTCATCTTGATTCTC
TTGTGGGCCAGGCTTTGTTCGGTG
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