CF510144

Overview
NameCF510144
Unique NameCF510144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length374
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHS2_TRISU (Chalcone synthase 2 OS=Trifolium subterraneum GN=CHS2 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 3.729e-63
Identity = 116/124 (93.55%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFG
Sbjct:   93 ARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 3.729e-63
Identity = 116/124 (93.55%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFG
Sbjct:   93 ARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 3.729e-63
Identity = 116/124 (93.55%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFG
Sbjct:   93 ARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 6.362e-63
Identity = 116/124 (93.55%), Postives = 122/124 (98.39%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKL+GLRPSVKRFMMYQQGCFAGGTVLR+AKDLAENN GARVLVVCSEITAVTFRGP+++HLDSLVGQALFG
Sbjct:   93 ARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRMAKDLAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 6.362e-63
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQD+VVVEVPKLGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTK +GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALFG
Sbjct:   93 ARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHSY_RAPSA (Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 8.308e-63
Identity = 116/123 (94.31%), Postives = 121/123 (98.37%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALF 370
            ARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF
Sbjct:   97 ARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 219
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHSY_MATIN (Chalcone synthase OS=Matthiola incana GN=CHS PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 8.308e-63
Identity = 116/123 (94.31%), Postives = 121/123 (98.37%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALF 370
            ARQDIVVVEVPKLGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF
Sbjct:   97 ARQDIVVVEVPKLGKEAAVRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 219
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 8.308e-63
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKL+GLR SVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALFG
Sbjct:   93 ARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFG 216
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHS7_PICMA (Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 8.308e-63
Identity = 115/124 (92.74%), Postives = 123/124 (99.19%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFG 373
            ARQD+VVVEVP+LGKEAATKAIKEWGQPKSKITH+IFCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLR+AKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDS+VGQALFG
Sbjct:   98 ARQDMVVVEVPRLGKEAATKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSMVGQALFG 221
[Close]
BLAST of CF510144 vs. ExPASy Swiss-Prot
Match: CHS3_SINAL (Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 8.308e-63
Identity = 116/123 (94.31%), Postives = 121/123 (98.37%), Query Frame = 2 
Query:    2 ARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALF 370
            ARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF
Sbjct:   98 ARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 220
The following BLAST results are available for this feature:
BLAST of CF510144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS2_TRISU3.729e-6393.55Chalcone synthase 2 OS=Trifolium subterraneum GN=C... [more]
CHS1_TRISU3.729e-6393.55Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHS1_PEA3.729e-6393.55Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ... [more]
CHSY_PERFR6.362e-6393.55Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHS7_SOYBN6.362e-6394.35Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV... [more]
CHSY_RAPSA8.308e-6394.31Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 ... [more]
CHSY_MATIN8.308e-6394.31Chalcone synthase OS=Matthiola incana GN=CHS PE=2 ... [more]
CHSJ_PETHY8.308e-6395.16Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHS7_PICMA8.308e-6392.74Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 ... [more]
CHS3_SINAL8.308e-6394.31Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-659 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510144 ID=CF510144; Name=CF510144; organism=Citrus sinensis; type=EST; length=374bp
CGCACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAGCTCGGGAAAGAAG
CTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTAAGATCACC
CACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGCGCCGACTA
CCAGCTCACCAAACTGATCGGCCTGCGCCCCTCCGTCAAGCGCTTCATGA
TGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCTTCGCCTCGCTAAA
GACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGA
GATCACGGCAGTCACTTTCCGCGGCCCTGCCGATACTCATCTTGATTCTC
TTGTGGGCCAGGCTTTGTTCGGTG
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