CF510189

Overview
NameCF510189
Unique NameCF510189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length285
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPP7_ARATH (Serine/threonine-protein phosphatase 7 OS=Arabidopsis thaliana GN=PP7 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.895e-15
Identity = 44/88 (50.00%), Postives = 52/88 (59.09%), Query Frame = 1
Query:   25 SPVTVCGDIHGQFHDLMKLFQ-TGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            S V V GDIHGQ HDL+ L + TG       Y+F GD+VDRG   LE F +LL  K   P  + LLRGNHES+  T +YGF  E   K
Sbjct:   77 SNVVVVGDIHGQLHDLLFLLKDTGFPCQNRCYVFNGDYVDRGAWGLETFLVLLSWKVLMPDRVYLLRGNHESKYCTSMYGFEKEVLTK 164          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPE2_MOUSE (Serine/threonine-protein phosphatase with EF-hands 2 OS=Mus musculus GN=Ppef2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.449e-15
Identity = 41/86 (47.67%), Postives = 49/86 (56.98%), Query Frame = 1
Query:   31 VTVCGDIHGQFHDLMKLFQTGG-HVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            VTVCGD+HGQ  DL+ +F   G   PE  Y+F GDFVDRG +S+EV  +L      YP    L RGNHE   +   YGF  E   K
Sbjct:  174 VTVCGDLHGQLDDLIFIFYKNGLPSPERAYVFNGDFVDRGKDSVEVLMVLFAFMLVYPKEFHLNRGNHEDHLVNLRYGFTKEVMHK 259          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: RDGC_DROME (Serine/threonine-protein phosphatase rdgC OS=Drosophila melanogaster GN=rdgC PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 1
Query:    7 NVQPVNSPV----TVCGDIHGQFHDLMKLFQTGGHVPETN-YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            N+ PV++ V    TVCGD+HG+  DL+ +    G    +N Y+F GDFVDRG   LEV  +LL L   +P  + L RGNHE   +   YGF  E + K
Sbjct:  141 NISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESK 238          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPE1_HUMAN (Serine/threonine-protein phosphatase with EF-hands 1 OS=Homo sapiens GN=PPEF1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 1
Query:   31 VTVCGDIHGQFHDLMKLFQTGGHVPETN-YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            VT+CGD+HG+  DL  +F   G   E N Y+F GDFVDRG NS+E+  IL +    YP ++ L RGNHE   +   YGF  E   K
Sbjct:  167 VTICGDLHGKLDDLFLIFYKNGLPSERNPYVFNGDFVDRGKNSIEILMILCVSFLVYPNDLHLNRGNHEDFMMNLRYGFTKEILHK 252          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP1L_ENCCU (Probable serine/threonine-protein phosphatase ECU05_0440 OS=Encephalitozoon cuniculi GN=ECU05_0440 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.200e-14
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 1
Query:   31 VTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            V + GD HGQ+ D++ +        +   IF GD+VDRG +S+E F +LL LK  +P  + L RGNHE   + +VYGFYDE +RK
Sbjct:  193 VLIFGDTHGQYFDVVSILNKVFD-KDRMVIFNGDYVDRGSHSVENFALLLSLKILFPGRVHLTRGNHELSDINRVYGFYDEVKRK 276          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPP7L_ARATH (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana GN=At1g48120 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.130e-14
Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 1
Query:   31 VTVCGDIHGQFHDLMKLFQTGGHVP-ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            V V GD+HGQ HDL+ L Q  G    +  Y+F G++VD G   LE F +LL  K   PA + LLRG+HES   T +YGF +E   K
Sbjct:  655 VVVVGDLHGQLHDLLYLMQDAGFPDGDRFYVFNGNYVDIGAWGLETFLLLLSWKVLLPARVYLLRGSHESESCTSMYGFKNEVLTK 740          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPP7I_ARATH (Serine/threonine-protein phosphatase 7 inactive homolog OS=Arabidopsis thaliana GN=At5g10900 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.345e-12
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 1
Query:   22 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETN-YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFY-DECQR 282
            +S V V GD+HGQ HDL+K+F   G   +   ++F G+++ RG  SLEVF +LL  K   P N+ LLRG+ E+R   +   F  D C R
Sbjct:  222 DSRVIVVGDLHGQLHDLLKIFDQSGRPSQNQCFVFNGNYIGRGSWSLEVFLVLLAWKIMMPENVILLRGSSETRVSAEELDFLKDICDR 310          
The following BLAST results are available for this feature:
BLAST of CF510189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PPP7_ARATH2.895e-1550.00Serine/threonine-protein phosphatase 7 OS=Arabidop... [more]
PPE2_MOUSE6.449e-1547.67Serine/threonine-protein phosphatase with EF-hands... [more]
RDGC_DROME1.437e-1442.86Serine/threonine-protein phosphatase rdgC OS=Droso... [more]
PPE1_HUMAN1.437e-1446.51Serine/threonine-protein phosphatase with EF-hands... [more]
PP1L_ENCCU3.200e-1444.71Probable serine/threonine-protein phosphatase ECU0... [more]
PPP7L_ARATH7.130e-1446.51Serine/threonine-protein phosphatase 7 long form h... [more]
PPP7I_ARATH1.345e-1242.70Serine/threonine-protein phosphatase 7 inactive ho... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-704 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510189 ID=CF510189; Name=CF510189; organism=Citrus sinensis; type=EST; length=285bp
GAGTCCAATGTGCAGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATAT
TCATGGCCAGTTTCATGACCTAATGAAACTTTTTCAAACAGGAGGTCATG
TACCAGAGACAAATTACATATTTATGGGTGATTTCGTTGATCGGGGTTAC
AATAGTCTTGAAGTTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCC
GGCAAATATTACTCTTTTACGTGGAAATCATGAAAGCAGACAACTGACCC
AGGTATATGGATTTTATGATGAGTGCCAGAGGAAG
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