CF510189

Overview
NameCF510189
Unique NameCF510189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length285
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4C_RABIT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Oryctolagus cuniculus GN=PPP4C PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 6.404e-39
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   39 ESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRK 133
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4C_PONAB (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Pongo abelii GN=PPP4C PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.404e-39
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   39 ESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRK 133
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4C_MOUSE (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Mus musculus GN=Ppp4c PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 6.404e-39
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   39 ESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRK 133
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4C_HUMAN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Homo sapiens GN=PPP4C PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.404e-39
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   39 ESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRK 133
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4C_BOVIN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Bos taurus GN=PPP4C PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.404e-39
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   39 ESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRK 133
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4CB_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit B OS=Danio rerio GN=ppp4cb PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.404e-39
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   39 ESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRK 133
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4CA_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit A OS=Danio rerio GN=ppp4ca PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.404e-39
Identity = 72/95 (75.79%), Postives = 83/95 (87.37%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGF+DEC RK
Sbjct:   43 ESNVQSVDSPVTVCGDIHGQFYDLKELFRVGGEVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFFDECHRK 137
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2A_ACECL (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Acetabularia cliftonii PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.404e-39
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            E NVQPV  PVTVCGDIHGQFHD+++LF+ GG  P+TNY+FMGD+VDRGYNS+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   39 EKNVQPVKMPVTVCGDIHGQFHDMVELFKIGGTCPDTNYLFMGDYVDRGYNSVETVTLLVSLKVRYPERITILRGNHESRQITQVYGFYDECLRK 133
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2A4_ARATH (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 6.404e-39
Identity = 71/95 (74.74%), Postives = 82/95 (86.32%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   46 ESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVALKMRYPQRITILRGNHESRQITQVYGFYDECLRK 140
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2A2_ERYGR (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Erysiphe graminis subsp. hordei GN=PP2A-2 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.404e-39
Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV  PVTVCGDIHGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   61 ESNVQPVKCPVTVCGDIHGQFHDLMELFRIGGPNPDTNYLFMGDYVDRGYYSVETVTLLVALKIRYPQRITILRGNHESRQITQVYGFYDECLRK 155
The following BLAST results are available for this feature:
BLAST of CF510189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP4C_RABIT6.404e-3976.84Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_PONAB6.404e-3976.84Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_MOUSE6.404e-3976.84Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_HUMAN6.404e-3976.84Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_BOVIN6.404e-3976.84Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CB_DANRE6.404e-3976.84Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CA_DANRE6.404e-3975.79Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2A_ACECL6.404e-3973.68Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A4_ARATH6.404e-3974.74Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A2_ERYGR6.404e-3975.79Serine/threonine-protein phosphatase PP2A-2 cataly... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-704 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510189 ID=CF510189; Name=CF510189; organism=Citrus sinensis; type=EST; length=285bp
GAGTCCAATGTGCAGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATAT
TCATGGCCAGTTTCATGACCTAATGAAACTTTTTCAAACAGGAGGTCATG
TACCAGAGACAAATTACATATTTATGGGTGATTTCGTTGATCGGGGTTAC
AATAGTCTTGAAGTTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCC
GGCAAATATTACTCTTTTACGTGGAAATCATGAAAGCAGACAACTGACCC
AGGTATATGGATTTTATGATGAGTGCCAGAGGAAG
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