CF510189

Overview
NameCF510189
Unique NameCF510189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length285
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2A1_EMENI (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Emericella nidulans GN=pphA PE=3 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 6.404e-39
Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV  PVTVCGDIHGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   62 ESNVQPVKCPVTVCGDIHGQFHDLMELFRIGGPNPDTNYLFMGDYVDRGYYSVETVTLLVCLKIRYPQRITILRGNHESRQITQVYGFYDECLRK 156          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2A3_ARATH (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 8.364e-39
Identity = 71/95 (74.74%), Postives = 82/95 (86.32%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   46 ESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRK 140          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPX1_PARTE (Serine/threonine-protein phosphatase PP-X homolog 1 OS=Paramecium tetraurelia GN=Ppx1 PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.092e-38
Identity = 71/95 (74.74%), Postives = 82/95 (86.32%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            E NV  V +PVT+CGDIHGQF+DLM+LF+ GG VPETNY+F+GDFVDRGYNS+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   36 EDNVIRVEAPVTICGDIHGQFYDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITLIRGNHESRQITQVYGFYDECLRK 130          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2A_BRANA (Serine/threonine-protein phosphatase PP2A catalytic subunit (Fragment) OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.092e-38
Identity = 71/95 (74.74%), Postives = 82/95 (86.32%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   42 ESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRK 136          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2A2_SCHPO (Major serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa2 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.427e-38
Identity = 69/95 (72.63%), Postives = 84/95 (88.42%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            E+NVQPV +PVTVCGDIHGQFHDLM+LF+ GG VP+ NY+FMGD+VDRGY+S+E  ++L+ +K RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   55 ENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRK 149          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPX4_PARTE (Serine/threonine-protein phosphatase PP-X homolog 4 OS=Paramecium tetraurelia GN=Ppx4 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.863e-38
Identity = 70/95 (73.68%), Postives = 83/95 (87.37%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V++PVT+CGDIHGQF DLM+LF+ GG  P+TNY+F+GDFVDRG+NS+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   38 ESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRK 132          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPX3_PARTE (Serine/threonine-protein phosphatase PP-X homolog 3 OS=Paramecium tetraurelia GN=Ppx3 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.863e-38
Identity = 70/95 (73.68%), Postives = 83/95 (87.37%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V++PVT+CGDIHGQF DLM+LF+ GG  P+TNY+F+GDFVDRG+NS+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   38 ESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRK 132          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPX2_PARTE (Serine/threonine-protein phosphatase PP-X homolog 2 OS=Paramecium tetraurelia GN=Ppx2 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.863e-38
Identity = 71/95 (74.74%), Postives = 81/95 (85.26%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            E NV  V +PVT+CGDIHGQF DLM+LF+ GG VPETNY+F+GDFVDRGYNS+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   36 EDNVIRVEAPVTICGDIHGQFQDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITLIRGNHESRQITQVYGFYDECLRK 130          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPP6_DROME (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Drosophila melanogaster GN=PpV PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.863e-38
Identity = 72/95 (75.79%), Postives = 84/95 (88.42%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            E+N+ PV++PVTVCGDIHGQF+DL +LF+TGG VP TNYIFMGDFVDRGY SLE FT LL LKARYP+ ITLLRGNHE+RQ+T+VYGF+DEC  K
Sbjct:   36 ETNILPVSTPVTVCGDIHGQFYDLEQLFRTGGQVPHTNYIFMGDFVDRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVYGFFDECFSK 130          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4C_DROME (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Drosophila melanogaster GN=Pp4-19C PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.178e-38
Identity = 72/95 (75.79%), Postives = 81/95 (85.26%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            E NVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPE NY+FMGDFVDRGY S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   39 EGNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPEKNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRK 133          
The following BLAST results are available for this feature:
BLAST of CF510189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2A1_EMENI6.404e-3975.79Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A3_ARATH8.364e-3974.74Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PPX1_PARTE1.092e-3874.74Serine/threonine-protein phosphatase PP-X homolog ... [more]
PP2A_BRANA1.092e-3874.74Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_SCHPO1.427e-3872.63Major serine/threonine-protein phosphatase PP2A-2 ... [more]
PPX4_PARTE1.863e-3873.68Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX3_PARTE1.863e-3873.68Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX2_PARTE1.863e-3874.74Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPP6_DROME1.863e-3875.79Serine/threonine-protein phosphatase 6 catalytic s... [more]
PP4C_DROME3.178e-3875.79Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-704 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510189 ID=CF510189; Name=CF510189; organism=Citrus sinensis; type=EST; length=285bp
GAGTCCAATGTGCAGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATAT
TCATGGCCAGTTTCATGACCTAATGAAACTTTTTCAAACAGGAGGTCATG
TACCAGAGACAAATTACATATTTATGGGTGATTTCGTTGATCGGGGTTAC
AATAGTCTTGAAGTTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCC
GGCAAATATTACTCTTTTACGTGGAAATCATGAAAGCAGACAACTGACCC
AGGTATATGGATTTTATGATGAGTGCCAGAGGAAG
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