CF510189

Overview
NameCF510189
Unique NameCF510189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length285
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2AB_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus GN=Ppp2cb PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.178e-38
Identity = 70/95 (73.68%), Postives = 81/95 (85.26%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   42 ESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRK 136
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2AB_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Oryctolagus cuniculus GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.178e-38
Identity = 70/95 (73.68%), Postives = 81/95 (85.26%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   42 ESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRK 136
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2AB_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (Fragment) OS=Sus scrofa GN=PPP2CB PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 3.178e-38
Identity = 70/95 (73.68%), Postives = 81/95 (85.26%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   26 ESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRK 120
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2AB_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus GN=Ppp2cb PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.178e-38
Identity = 70/95 (73.68%), Postives = 81/95 (85.26%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   42 ESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRK 136
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2AB_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.178e-38
Identity = 70/95 (73.68%), Postives = 81/95 (85.26%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   42 ESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRK 136
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2AB_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Bos taurus GN=PPP2CB PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.178e-38
Identity = 70/95 (73.68%), Postives = 81/95 (85.26%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   42 ESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRK 136
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2AA_CHICK (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Gallus gallus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.178e-38
Identity = 70/95 (73.68%), Postives = 81/95 (85.26%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   42 ESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRK 136
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPX1_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 1 OS=Arabidopsis thaliana GN=PPX1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.151e-38
Identity = 70/95 (73.68%), Postives = 83/95 (87.37%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQ V++PVT+CGDIHGQF+D+M+LF+ GG  P+TNY+FMGDFVDRGY S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   36 ESNVQRVDAPVTLCGDIHGQFYDMMELFKVGGDCPKTNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRK 130
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2AA_DICDI (Serine/threonine-protein phosphatase 2A catalytic subunit A OS=Dictyostelium discoideum GN=pho2A PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.421e-38
Identity = 69/95 (72.63%), Postives = 82/95 (86.32%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNVQPV  PVTVCGDIHGQFHDLM+LF+ GG+ P+TNY+FMGD+VDRG+ S+E  T+L+ LK RY   +T+LRGNHESRQ+TQVYGFYDEC RK
Sbjct:   39 ESNVQPVRCPVTVCGDIHGQFHDLMELFKIGGNCPDTNYLFMGDYVDRGFYSVETVTLLVALKVRYKDRVTILRGNHESRQITQVYGFYDECLRK 133
[Close]
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEBR (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis briggsae GN=pph-4.1 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.577e-37
Identity = 68/95 (71.58%), Postives = 82/95 (86.32%), Query Frame = 1 
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            E NVQ ++SPVT+CGDIHGQF+DLM+LF+ GG VP TNY+F+GDFVDRG+ S+E F +LL LKARYP  + L+RGNHESRQ+TQVYGFYDEC RK
Sbjct:   64 EGNVQVIDSPVTICGDIHGQFYDLMELFRVGGPVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDECMRK 158
The following BLAST results are available for this feature:
BLAST of CF510189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2AB_RAT3.178e-3873.68Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_RABIT3.178e-3873.68Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_PIG3.178e-3873.68Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_MOUSE3.178e-3873.68Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_HUMAN3.178e-3873.68Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_BOVIN3.178e-3873.68Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_CHICK3.178e-3873.68Serine/threonine-protein phosphatase 2A catalytic ... [more]
PPX1_ARATH4.151e-3873.68Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PP2AA_DICDI5.421e-3872.63Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP4C1_CAEBR1.577e-3771.58Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-704 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510189 ID=CF510189; Name=CF510189; organism=Citrus sinensis; type=EST; length=285bp
GAGTCCAATGTGCAGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATAT
TCATGGCCAGTTTCATGACCTAATGAAACTTTTTCAAACAGGAGGTCATG
TACCAGAGACAAATTACATATTTATGGGTGATTTCGTTGATCGGGGTTAC
AATAGTCTTGAAGTTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCC
GGCAAATATTACTCTTTTACGTGGAAATCATGAAAGCAGACAACTGACCC
AGGTATATGGATTTTATGATGAGTGCCAGAGGAAG
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