CF510189

Overview
NameCF510189
Unique NameCF510189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length285
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: YD44_SCHPO (Putative serine/threonine-protein phosphatase C22H10.04 OS=Schizosaccharomyces pombe GN=SPAC22H10.04 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.404e-32
Identity = 61/95 (64.21%), Postives = 76/95 (80.00%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNV  +++P+TV GDIHGQF DL+++F+ GG  P TNY+F+GD+VDRGY S+E  T+L+ LK RYP  ITLLRGNHESR +TQ YGFY EC RK
Sbjct:   36 ESNVVRLSTPITVVGDIHGQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHESRGITQTYGFYSECLRK 130          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP2A4_YEAST (Serine/threonine-protein phosphatase PP2A-like PPG1 OS=Saccharomyces cerevisiae GN=PPG1 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 4.445e-32
Identity = 60/95 (63.16%), Postives = 77/95 (81.05%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNV  + +PVTV GD+HGQFHD++++FQ GG VP+TNY+F+GD+VDRG  S+E   +L++LK RYP+ I LLRGNHESRQ+TQ YGFY EC  K
Sbjct:   35 ESNVIHIQTPVTVVGDMHGQFHDMLEIFQIGGPVPDTNYLFLGDYVDRGLYSVETIMLLIVLKLRYPSRIHLLRGNHESRQITQSYGFYTECLNK 129          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4C_YEAST (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH3 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 5.806e-32
Identity = 62/95 (65.26%), Postives = 75/95 (78.95%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            E NV  V++PVT+CGDIHGQ HDL+ LF+  G V +T YIF+GDFVDRG+ SLE F +LL  K RYP  ITL+RGNHE+RQ+T+VYGFYDE  RK
Sbjct:   36 EGNVTQVDTPVTICGDIHGQLHDLLTLFEKSGGVEKTRYIFLGDFVDRGFYSLESFLLLLCYKLRYPDRITLIRGNHETRQITKVYGFYDEVVRK 130          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4C_KLULA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Kluyveromyces lactis GN=PPH3 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.439e-30
Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNV  V++PVT+CGDIHGQ HDL+ LF   G + +  YIF+GDFVDRG+ SLE F +L+  K RYP  I L+RGNHE+RQ+T+VYGFYDE  RK
Sbjct:   36 ESNVTHVDTPVTICGDIHGQLHDLLTLFAKSGGIEKNRYIFLGDFVDRGFYSLESFLLLVCYKLRYPDRIVLIRGNHETRQITKVYGFYDEVVRK 130          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP4C_ASHGO (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Ashbya gossypii GN=PPH3 PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 4.161e-30
Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            ESNV  V++PVT+CGDIHGQ HDL+ LF+    + +  +IF+GDFVDRG+ SLE F +LL  K RYP  ITL+RGNHE+RQ+T+VYGFYDE  RK
Sbjct:   38 ESNVTHVDTPVTICGDIHGQLHDLLTLFEKSEGIEKNRFIFLGDFVDRGFYSLESFLLLLCYKLRYPDRITLIRGNHETRQITKVYGFYDEVIRK 132          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP19_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 9 OS=Arabidopsis thaliana GN=TOPP9 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.748e-28
Identity = 50/95 (52.63%), Postives = 73/95 (76.84%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + N+  +++P+ +CGDIHGQ+ DL++LF+ GG+ P  NY+F+GD+VDRG  SLE   +LL  K RYP+ I LLRGNHE  ++ ++YGFYDEC+R+
Sbjct:   51 QPNLLELHAPIRICGDIHGQYQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIFLLRGNHEDAKINRIYGFYDECKRR 145          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP18_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 8 OS=Arabidopsis thaliana GN=TOPP8 PE=2 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 1.748e-28
Identity = 50/95 (52.63%), Postives = 73/95 (76.84%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + N+  +++P+ +CGDIHGQ+ DL++LF+ GG+ P  NY+F+GD+VDRG  SLE   +LL  K RYP+ I LLRGNHE  ++ ++YGFYDEC+R+
Sbjct:   51 QPNLLDLHAPIRICGDIHGQYQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYLLRGNHEDAKINRIYGFYDECKRR 145          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP11_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Arabidopsis thaliana GN=TOPP1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.748e-28
Identity = 51/95 (53.68%), Postives = 71/95 (74.74%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + N+  + +P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHES  + ++YGFYDEC+R+
Sbjct:   62 QPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHESASINRIYGFYDECKRR 156          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP1_ORYSJ (Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica GN=Os03g0268000 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 6.642e-28
Identity = 50/95 (52.63%), Postives = 70/95 (73.68%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + N+  + +P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R+
Sbjct:   60 QPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 154          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP1A_MOUSE (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus GN=Ppp1ca PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.642e-28
Identity = 50/89 (56.18%), Postives = 69/89 (77.53%), Query Frame = 1
Query:   19 VNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + +P+ +CGDIHGQ++DL++LF+ GG  PE+NY+F+GD+VDRG  SLE   +LL  K RYP N  LLRGNHE   + ++YGFYDEC+R+
Sbjct:   55 LEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRR 143          
The following BLAST results are available for this feature:
BLAST of CF510189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
YD44_SCHPO3.404e-3264.21Putative serine/threonine-protein phosphatase C22H... [more]
PP2A4_YEAST4.445e-3263.16Serine/threonine-protein phosphatase PP2A-like PPG... [more]
PP4C_YEAST5.806e-3265.26Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_KLULA2.439e-3062.11Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_ASHGO4.161e-3062.11Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP19_ARATH1.748e-2852.63Serine/threonine-protein phosphatase PP1 isozyme 9... [more]
PP18_ARATH1.748e-2852.63Serine/threonine-protein phosphatase PP1 isozyme 8... [more]
PP11_ARATH1.748e-2853.68Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP1_ORYSJ6.642e-2852.63Serine/threonine-protein phosphatase PP1 OS=Oryza ... [more]
PP1A_MOUSE6.642e-2856.18Serine/threonine-protein phosphatase PP1-alpha cat... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-704 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510189 ID=CF510189; Name=CF510189; organism=Citrus sinensis; type=EST; length=285bp
GAGTCCAATGTGCAGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATAT
TCATGGCCAGTTTCATGACCTAATGAAACTTTTTCAAACAGGAGGTCATG
TACCAGAGACAAATTACATATTTATGGGTGATTTCGTTGATCGGGGTTAC
AATAGTCTTGAAGTTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCC
GGCAAATATTACTCTTTTACGTGGAAATCATGAAAGCAGACAACTGACCC
AGGTATATGGATTTTATGATGAGTGCCAGAGGAAG
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