CF510189

Overview
NameCF510189
Unique NameCF510189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length285
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP17_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 7 OS=Arabidopsis thaliana GN=TOPP7 PE=2 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 6.642e-28
Identity = 50/95 (52.63%), Postives = 72/95 (75.79%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + N+  + +PV +CGDIHGQ+ DL++LF+ GG+ P +NY+F+GD+VDRG  SLE   +LL  K ++P N  LLRGNHES  + ++YGFYDEC+R+
Sbjct:   45 QPNLLELEAPVKICGDIHGQYPDLLRLFEHGGYPPNSNYLFLGDYVDRGKQSLETICLLLAYKIKFPENFFLLRGNHESASINRIYGFYDECKRR 139          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.675e-28
Identity = 50/95 (52.63%), Postives = 70/95 (73.68%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + N+  + +P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R+
Sbjct:   53 QPNLLELEAPIKICGDIHGQYGDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 147          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP11_SCHPO (Serine/threonine-protein phosphatase PP1-1 OS=Schizosaccharomyces pombe GN=dis2 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.133e-27
Identity = 49/89 (55.06%), Postives = 69/89 (77.53%), Query Frame = 1
Query:   19 VNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + +P+ +CGDIHGQ++DL++LF+ GG  PE NY+F+GD+VDRG  SLEV  +LL  K +YP N  +LRGNHE   + ++YGFYDEC+R+
Sbjct:   54 LEAPLKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRR 142          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP11_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.133e-27
Identity = 49/95 (51.58%), Postives = 70/95 (73.68%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + N+  + +P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  +LRGNHE   + ++YGFYDEC+R+
Sbjct:   46 QPNLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAFKIKYPENFFILRGNHECASINRIYGFYDECKRR 140          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PPIG_XENTR (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Xenopus tropicalis GN=ppp1cc PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.480e-27
Identity = 49/89 (55.06%), Postives = 69/89 (77.53%), Query Frame = 1
Query:   19 VNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + +P+ +CGDIHGQ++DL++LF+ GG  PE+NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R+
Sbjct:   55 LEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 143          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP1_MAIZE (Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.480e-27
Identity = 48/95 (50.53%), Postives = 70/95 (73.68%), Query Frame = 1
Query:    1 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + N+  + +P+ +CGD+HGQ+ DL++LF  GG+ P+ NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R+
Sbjct:   46 QPNLLELEAPIKICGDVHGQYSDLLRLFDYGGYPPQANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASVNRIYGFYDECKRR 140          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP1G_RAT (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.480e-27
Identity = 49/89 (55.06%), Postives = 69/89 (77.53%), Query Frame = 1
Query:   19 VNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + +P+ +CGDIHGQ++DL++LF+ GG  PE+NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R+
Sbjct:   55 LEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 143          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP1G_MOUSE (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.480e-27
Identity = 49/89 (55.06%), Postives = 69/89 (77.53%), Query Frame = 1
Query:   19 VNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + +P+ +CGDIHGQ++DL++LF+ GG  PE+NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R+
Sbjct:   55 LEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 143          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP1G_HUMAN (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Homo sapiens GN=PPP1CC PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.480e-27
Identity = 49/89 (55.06%), Postives = 69/89 (77.53%), Query Frame = 1
Query:   19 VNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + +P+ +CGDIHGQ++DL++LF+ GG  PE+NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R+
Sbjct:   55 LEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 143          
BLAST of CF510189 vs. ExPASy Swiss-Prot
Match: PP1G_BOVIN (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Bos taurus GN=PPP1CC PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.480e-27
Identity = 49/89 (55.06%), Postives = 69/89 (77.53%), Query Frame = 1
Query:   19 VNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 285
            + +P+ +CGDIHGQ++DL++LF+ GG  PE+NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R+
Sbjct:   55 LEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 143          
The following BLAST results are available for this feature:
BLAST of CF510189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP17_ARATH6.642e-2852.63Serine/threonine-protein phosphatase PP1 isozyme 7... [more]
PP12_TOBAC8.675e-2852.63Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP11_SCHPO1.133e-2755.06Serine/threonine-protein phosphatase PP1-1 OS=Schi... [more]
PP11_ACECL1.133e-2751.58Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PPIG_XENTR1.480e-2755.06Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1_MAIZE1.480e-2750.53Serine/threonine-protein phosphatase PP1 OS=Zea ma... [more]
PP1G_RAT1.480e-2755.06Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_MOUSE1.480e-2755.06Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_HUMAN1.480e-2755.06Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_BOVIN1.480e-2755.06Serine/threonine-protein phosphatase PP1-gamma cat... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-704 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510189 ID=CF510189; Name=CF510189; organism=Citrus sinensis; type=EST; length=285bp
GAGTCCAATGTGCAGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATAT
TCATGGCCAGTTTCATGACCTAATGAAACTTTTTCAAACAGGAGGTCATG
TACCAGAGACAAATTACATATTTATGGGTGATTTCGTTGATCGGGGTTAC
AATAGTCTTGAAGTTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCC
GGCAAATATTACTCTTTTACGTGGAAATCATGAAAGCAGACAACTGACCC
AGGTATATGGATTTTATGATGAGTGCCAGAGGAAG
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