CF510252

Overview
NameCF510252
Unique NameCF510252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 1.709e-79
Identity = 150/173 (86.71%), Postives = 161/173 (93.06%), Query Frame = 1 
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA G +GEI++A+EA + A    GFFELQPKEGLALVNGTAVGSGLAS+VLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV  AKKLHE+DPLQKPKQDRYALRTSPQWLGP IEVIRF+TKSIEREIN
Sbjct:  214 VPLSYIAGLLTGRPNSKAHGTSGEILNAKEAFQSAEINDGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREIN 386
[Close]
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL4_POPKI (Phenylalanine ammonia-lyase G4 (Fragment) OS=Populus kitakamiensis GN=PALG4 PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 3.807e-79
Identity = 150/173 (86.71%), Postives = 156/173 (90.17%), Query Frame = 1 
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GPNGE + A EA   AG   GFFELQPKEGLALVNGTAVGSGLASMVLFE N LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAA+MEHILDGSSYV  A+KLHEIDPLQKPKQDRYALRTSPQWLGP IEVIR +TK IEREIN
Sbjct:   61 VPLSYIAGLLTGRPNSKAVGPNGETMAAAEAFTLAGINGGFFELQPKEGLALVNGTAVGSGLASMVLFETNVLAILSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAVMEHILDGSSYVKAAQKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRTSTKMIEREIN 233
[Close]
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 3.807e-79
Identity = 149/173 (86.13%), Postives = 157/173 (90.75%), Query Frame = 1 
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GPNGE ++A+EA + AG   GFFELQPKEGLALVNGTAVGSGLASMVLF+AN LA+ SE+LSAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV   +KLHE DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  203 VPLSYIAGLLTGRPNSKAIGPNGETLNAEEAFRVAGVNSGFFELQPKEGLALVNGTAVGSGLASMVLFDANILAVFSEVLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAPQKLHETDPLQKPKQDRYALRTSPQWLGPQIEVIRSATKMIEREIN 375
[Close]
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL1_LITER (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 4.972e-79
Identity = 148/173 (85.55%), Postives = 158/173 (91.33%), Query Frame = 1 
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GP GE I+A+EA + AG   GFFELQPKEGLALVNGTAVGSG+ASMVL+EAN LA+LSE++SAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS YV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  201 VPLSYIAGLLTGRPNSKAVGPTGEKINAEEAFRLAGISTGFFELQPKEGLALVNGTAVGSGMASMVLYEANILAVLSEVISAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSGYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSATKMIEREIN 373
[Close]
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 8.481e-79
Identity = 150/173 (86.71%), Postives = 158/173 (91.33%), Query Frame = 1 
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGR NSKA GP GEI+  +EA + AG   GFFELQPKEGLALVNGTAVGSGLASMVLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE+DPLQKPKQDRYALRTSPQWLGP IEVIR +TKSIEREIN
Sbjct:  205 VPLSYIAGLLTGRHNSKAVGPTGEILHPKEAFRLAGVEGGFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRSSTKSIEREIN 377
[Close]
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.108e-78
Identity = 147/173 (84.97%), Postives = 158/173 (91.33%), Query Frame = 1 
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GP G I+  +EA K AG   GFFELQPKEGLALVNGTAVGSG+ASMVLFEAN LA+L+E++SAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR +TK IEREIN
Sbjct:  207 VPLSYIAGLLTGRPNSKAVGPTGVILSPEEAFKLAGVEGGFFELQPKEGLALVNGTAVGSGMASMVLFEANILAVLAEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREIN 379
[Close]
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL2_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.108e-78
Identity = 149/173 (86.13%), Postives = 157/173 (90.75%), Query Frame = 1 
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GPNGE + A+EA K AG   GFFELQPKEGLALVNGTAVGSG+ASMVLFEAN LA+LSE+LSAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILD S Y+  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  199 VPLSYIAGLLTGRPNSKAVGPNGEALTAEEAFKLAGVQGGFFELQPKEGLALVNGTAVGSGMASMVLFEANVLAVLSEVLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDRSYYMKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRQATKMIEREIN 371
[Close]
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL2_ARATH (Phenylalanine ammonia-lyase 2 OS=Arabidopsis thaliana GN=PAL2 PE=1 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 1.108e-78
Identity = 146/173 (84.39%), Postives = 162/173 (93.64%), Query Frame = 1 
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKATGP+GE + A+EA ++AG   GFF+LQPKEGLALVNGTAVGSG+ASMVLFEAN  A+L+E+LSAIFAEVM GKPEFTDHLTH+LKHHPGQIEAAAIMEHILDGSSY+ +A+K+HE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATKSIEREIN
Sbjct:  208 VPLSYIAGLLTGRPNSKATGPDGESLTAKEAFEKAGISTGFFDLQPKEGLALVNGTAVGSGMASMVLFEANVQAVLAEVLSAIFAEVMSGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSSYMKLAQKVHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRQATKSIEREIN 380
[Close]
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.108e-78
Identity = 147/173 (84.97%), Postives = 158/173 (91.33%), Query Frame = 1 
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GP G I+  +EA K AG   GFFELQPKEGLALVNGTAVGSG+ASMVLFEAN LA+L+E++SAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR +TK IEREIN
Sbjct:  207 VPLSYIAGLLTGRPNSKAVGPTGVILSPEEAFKLAGVEGGFFELQPKEGLALVNGTAVGSGMASMVLFEANILAVLAEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREIN 379
[Close]
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL5_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL5 PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 1.447e-78
Identity = 147/173 (84.97%), Postives = 159/173 (91.91%), Query Frame = 1 
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GPNGE ++A+E  + AG   GFFELQPKEGLALVNGTAVGSG+ASMVLFE+N LA++SE+LSAIFAEVM GKPEFTD+LTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  212 VPLSYIAGLLTGRPNSKAVGPNGEKLNAEERFRVAGVTSGFFELQPKEGLALVNGTAVGSGMASMVLFESNILAVMSEVLSAIFAEVMNGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREIN 384
The following BLAST results are available for this feature:
BLAST of CF510252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
PAL1_PEA1.709e-7986.71Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PAL4_POPKI3.807e-7986.71Phenylalanine ammonia-lyase G4 (Fragment) OS=Popul... [more]
PAL3_TOBAC3.807e-7986.13Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL1_LITER4.972e-7985.55Phenylalanine ammonia-lyase 1 OS=Lithospermum eryt... [more]
PALY_CAMSI8.481e-7986.71Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PAL2_PETCR1.108e-7884.97Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]
PAL2_IPOBA1.108e-7886.13Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=... [more]
PAL2_ARATH1.108e-7884.39Phenylalanine ammonia-lyase 2 OS=Arabidopsis thali... [more]
PAL1_PETCR1.108e-7884.97Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]
PAL5_SOLLC1.447e-7884.97Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_123000-869 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-67_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510252 ID=CF510252; Name=CF510252; organism=Citrus sinensis; type=EST; length=513bp
GTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAA
GGCCACCGGGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAAC
AAGCGGGTTTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTT
GTCAATGGCACTGCTGTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGA
GGCTAACAACCTTGCTCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTG
AAGTCATGCAAGGCAAACCTGAGTTCACCGATCACTTGACACACAAATTG
AAGCACCATCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACATATCCT
CGATGGCAGCTCTTATGTTAACGTGGCTAAGAAGTTGCATGAGATTGATC
CTCTGCAGAAGCCGAAACAGGATCGTTATGCCCTGAGAACTTCACCACAA
TGGCTCGGCCCTCAGATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGA
ACGGGAGATCAAC
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