CF510252

Overview
NameCF510252
Unique NameCF510252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_BRUAB (Histidine ammonia-lyase OS=Brucella abortus GN=hutH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12
Identity = 51/170 (30.00%), Postives = 83/170 (48.82%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++   + G   +      GE +   +A  +AG     L  KEGLAL+NGT   + LA   LF A+  A  + I  A+  +   G         H+L+ H GQI+A   +  +L+GS+   + +   E D   +  QD Y +R  PQ  G  ++++R A +++E E N
Sbjct:  148 PLAHMTAAMIGEGEAFY---RGERLSGAKALGKAGLKPVVLAAKEGLALINGTQTSTALALAGLFRAHRAARTALITGALSTDAAMGSDAPFHEEIHQLRGHKGQIDAGRALRTLLEGSA---IRRSHLEGD---QRVQDPYCIRCQPQVDGACLDILRQAARTLEIEAN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_BRUA2 (Histidine ammonia-lyase OS=Brucella abortus (strain 2308) GN=hutH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12
Identity = 51/170 (30.00%), Postives = 83/170 (48.82%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++   + G   +      GE +   +A  +AG     L  KEGLAL+NGT   + LA   LF A+  A  + I  A+  +   G         H+L+ H GQI+A   +  +L+GS+   + +   E D   +  QD Y +R  PQ  G  ++++R A +++E E N
Sbjct:  148 PLAHMTAAMIGEGEAFY---RGERLSGAKALGKAGLKPVVLAAKEGLALINGTQTSTALALAGLFRAHRAARTALITGALSTDAAMGSDAPFHEEIHQLRGHKGQIDAGRALRTLLEGSA---IRRSHLEGD---QRVQDPYCIRCQPQVDGACLDILRQAARTLEIEAN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_BRUA1 (Histidine ammonia-lyase OS=Brucella abortus (strain S19) GN=hutH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12
Identity = 51/170 (30.00%), Postives = 83/170 (48.82%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++   + G   +      GE +   +A  +AG     L  KEGLAL+NGT   + LA   LF A+  A  + I  A+  +   G         H+L+ H GQI+A   +  +L+GS+   + +   E D   +  QD Y +R  PQ  G  ++++R A +++E E N
Sbjct:  148 PLAHMTAAMIGEGEAFY---RGERLSGAKALGKAGLKPVVLAAKEGLALINGTQTSTALALAGLFRAHRAARTALITGALSTDAAMGSDAPFHEEIHQLRGHKGQIDAGRALRTLLEGSA---IRRSHLEGD---QRVQDPYCIRCQPQVDGACLDILRQAARTLEIEAN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_BRASB (Histidine ammonia-lyase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=hutH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12
Identity = 54/175 (30.86%), Postives = 87/175 (49.71%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNL---ALLSEILS--AIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++  ++ G   +     +G ++  +EA   AG     L PKEGLAL+NGT   +  A   L  A++L   AL++  LS  A  A     +PE        L+ HPGQI A  ++  +LDGS     A +L  ++  ++  QD Y LR  PQ  G  ++++    +++  E N
Sbjct:  148 PLAHMTAVMIGEGQAFV---DGRLVPGREALAHAGLAPVTLGPKEGLALINGTQFSTAYALAGLLRAHDLLKAALVTGALSVDAAMASTAPFRPEI-----QALRGHPGQIAAGRVLTELLDGS-----AIRLSHLEGDER-VQDPYCLRCQPQVAGAALDLLTQTARTLVTEAN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_BACSK (Histidine ammonia-lyase OS=Bacillus clausii (strain KSM-K16) GN=hutH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12
Identity = 51/170 (30.00%), Postives = 77/170 (45.29%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PLS++A +L G    +     GE +       + G     LQ KEGLAL+NGT   + +  +   EA  LA   E ++A+  E +QG  +  D   H  + +  QI+ AA M H+L GS               +K  QD Y+LR  PQ  G   + + +    +  E+N
Sbjct:  147 PLSHLALVLIGEGEVRY---RGECMSTASCFAKLGIQPLTLQAKEGLALINGTQAMTAVGVVAYLEAEKLAYQGEQIAAVTMEGLQGIIDAFDQAVHVARGYQEQIDVAARMRHLLQGSKLTTKQG--------EKRVQDAYSLRCIPQVHGAVWQALGYVKDKLLIEMN 305          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_MYXXD (Histidine ammonia-lyase OS=Myxococcus xanthus (strain DK 1622) GN=hutH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.241e-12
Identity = 54/174 (31.03%), Postives = 89/174 (51.15%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS----SYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++A +  G   +      G+ + A++A ++AG     L+ KEGLALVNGT     + +++   A +LA ++++  A+  E + G  +      H ++ HPGQ + AA +  IL  S    S+VN +K            QD Y+LR  PQ  G   E I F+ + +E E+N
Sbjct:  151 PLAHLALVFIGEGEAFY---QGQRMPAKQALERAGLQPVVLEAKEGLALVNGTQAMCAVGTLLQLRAESLADIADVAGAMTLEGLLGSHKPFIPEIHDVRAHPGQKDVAAHLRRILVDSELVESHVNCSK-----------VQDPYSLRCMPQVHGAAREGIAFSRRILEVEVN 310          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_ACIBL (Histidine ammonia-lyase OS=Acidobacteria bacterium (strain Ellin345) GN=hutH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.241e-12
Identity = 45/149 (30.20%), Postives = 72/149 (48.32%), Query Frame = 1
Query:   67 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            G+ +   EA + AG     L+ KE ++L+NGT     +  + + +A  LA  ++ + A+  +V+QG     D   HK + H GQI+ AA +  +L GS       ++HE        QD Y+LR  PQ  G   + I +     E E+N
Sbjct:  167 GKRVSGAEALRAAGIKPITLEAKETISLINGTQAMLAVGLLAVLDAEILAETADAVGALALDVLQGTDAAFDERIHKARPHSGQIQVAANLRRLLAGS-------QIHESHKDCARVQDAYSLRCMPQVHGAVRDTIHYCRSVFEVEMN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_RHILO (Histidine ammonia-lyase OS=Rhizobium loti GN=hutH PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 52/170 (30.59%), Postives = 82/170 (48.24%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PLS++  ++ G    +   P+G    A+ A    G     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  +  +G     D   H L+ H GQIE A  + +++ GS+     ++ H +    +  QD Y LR  PQ +G  ++V+R A  ++  E N
Sbjct:  148 PLSHMTAVMIGV--GECFTPHGRF-PAKVAFVSHGLEPVTLGAKEGLALLNGTQFSTAYALAALFEAEVLYQSALVAGALSTDAAKGSDAPFDPRIHLLRKHRGQIETAEALRNLMAGSA----IRESHRVG--DERVQDPYCLRCQPQVMGAALDVLRKAADTLGTEAN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_PSESM (Histidine ammonia-lyase OS=Pseudomonas syringae pv. tomato GN=hutH PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12
Identity = 54/170 (31.76%), Postives = 83/170 (48.82%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G   ++     GE ++A +A   AG     L  KEGLAL+NGT V +  A   LFE  +L   +    ++  E + G     D   H  +   GQI+AAA    +L  SS   V++     D +Q P    Y+LR  PQ +G  +  +R A + +E E N
Sbjct:  154 PLAHMSLVLLGEGKARH---KGEWLNAVDALAVAGLKPLTLAAKEGLALLNGTQVSTAYALRGLFEGEDLFAAALTCGSLTVEAVLGSRSPFDARIHAARGQRGQIDAAACYRELLGESS--GVSESHRNCDKVQDP----YSLRCQPQVMGACLTQLRQAAEVLEVESN 314          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTIH_BRUME (Bifunctional imidazolonepropionase/histidine ammonia-lyase OS=Brucella melitensis GN=hutIH PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 8.940e-12
Identity = 51/170 (30.00%), Postives = 82/170 (48.24%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++   + G   +      GE +   +A  +AG     L  KEGLAL+NGT   + LA   LF A+  A  + I  A+  +   G         H+L+ H GQI+A   +  +L+GS+   + +   E D   +  QD Y  R  PQ  G  ++++R A +++E E N
Sbjct:  562 PLAHMTAAMIGEGEAFY---RGERLSGAKALGKAGLKPVVLAAKEGLALINGTQTSTALALAGLFRAHRAARTALITGALSTDAAMGSDAPFHEEIHQLRGHKGQIDAGRALRTLLEGSA---IRRSHLEGD---QRVQDPYCXRCQPQVDGACLDILRQAARTLEIEAN 722          
The following BLAST results are available for this feature:
BLAST of CF510252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
HUTH_BRUAB4.013e-1230.00Histidine ammonia-lyase OS=Brucella abortus GN=hut... [more]
HUTH_BRUA24.013e-1230.00Histidine ammonia-lyase OS=Brucella abortus (strai... [more]
HUTH_BRUA14.013e-1230.00Histidine ammonia-lyase OS=Brucella abortus (strai... [more]
HUTH_BRASB4.013e-1230.86Histidine ammonia-lyase OS=Bradyrhizobium sp. (str... [more]
HUTH_BACSK4.013e-1230.00Histidine ammonia-lyase OS=Bacillus clausii (strai... [more]
HUTH_MYXXD5.241e-1231.03Histidine ammonia-lyase OS=Myxococcus xanthus (str... [more]
HUTH_ACIBL5.241e-1230.20Histidine ammonia-lyase OS=Acidobacteria bacterium... [more]
HUTH_RHILO6.845e-1230.59Histidine ammonia-lyase OS=Rhizobium loti GN=hutH ... [more]
HUTH_PSESM6.845e-1231.76Histidine ammonia-lyase OS=Pseudomonas syringae pv... [more]
HUTIH_BRUME8.940e-1230.00Bifunctional imidazolonepropionase/histidine ammon... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_123000-869 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-67_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510252 ID=CF510252; Name=CF510252; organism=Citrus sinensis; type=EST; length=513bp
GTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAA
GGCCACCGGGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAAC
AAGCGGGTTTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTT
GTCAATGGCACTGCTGTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGA
GGCTAACAACCTTGCTCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTG
AAGTCATGCAAGGCAAACCTGAGTTCACCGATCACTTGACACACAAATTG
AAGCACCATCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACATATCCT
CGATGGCAGCTCTTATGTTAACGTGGCTAAGAAGTTGCATGAGATTGATC
CTCTGCAGAAGCCGAAACAGGATCGTTATGCCCTGAGAACTTCACCACAA
TGGCTCGGCCCTCAGATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGA
ACGGGAGATCAAC
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