CF510252

Overview
NameCF510252
Unique NameCF510252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 1.889e-78
Identity = 148/173 (85.55%), Postives = 157/173 (90.75%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAG+LTGRPNSKA GP+G+ + A EA +  G   GFFELQPKEGLALVNGTAVGSGLAS VLF+ N LALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  AKKLHE DPLQKPKQDRYALRTSPQWLGPQIEVIR++TKSIEREI+
Sbjct:  208 VPLSYIAGMLTGRPNSKAVGPDGQTLSAAEAFEFVGINSGFFELQPKEGLALVNGTAVGSGLASTVLFDTNILALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEQDPLQKPKQDRYALRTSPQWLGPQIEVIRYSTKSIEREID 380          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL3_PETCR (Phenylalanine ammonia-lyase 3 OS=Petroselinum crispum GN=PAL3 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 4.209e-78
Identity = 146/173 (84.39%), Postives = 157/173 (90.75%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GP G  +  +EA K AG   GFFELQPKEGLALVNGTAVGSG+ASMVLFEAN LA+L+E++SAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR +TK IEREIN
Sbjct:  209 VPLSYIAGLLTGRPNSKAVGPTGVTLSPEEAFKLAGVEGGFFELQPKEGLALVNGTAVGSGMASMVLFEANILAVLAEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREIN 381          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 5.497e-78
Identity = 148/173 (85.55%), Postives = 160/173 (92.49%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFG--FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGR NSKA GP+GE+++A+EA + AG    FFELQPKEGLALVNGTAVGSGLAS+VLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL GS+YV  AKKLHE+DPLQKPKQDRYALRTSPQWLGP IEVIRF+TKSIEREIN
Sbjct:  216 VPLSYIAGLLTGRSNSKAHGPSGEMLNAKEAFQLAGINAEFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILHGSAYVKDAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREIN 388          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL2_POPKI (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis GN=PALG2B PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 5.497e-78
Identity = 149/173 (86.13%), Postives = 156/173 (90.17%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GPNGE +   EA  QAG   GFFELQPKEGLALVNGTAVGSGLASMVLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQI AAAIMEHILDGS+YV  A+KLHEIDPLQKPKQDR+ALRTSPQWLGP IEVIR +TK IEREIN
Sbjct:  202 VPLSYIAGLLTGRPNSKAVGPNGEPLTPAEAFTQAGIDGGFFELQPKEGLALVNGTAVGSGLASMVLFEANVLAILSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIVAAAIMEHILDGSAYVKEAQKLHEIDPLQKPKQDRHALRTSPQWLGPLIEVIRTSTKMIEREIN 374          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 5.497e-78
Identity = 147/173 (84.97%), Postives = 156/173 (90.17%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GP GE + A EA K AG   GFFELQPKEGLALVNGTAVGSG+ASMVLFE N LA+L+E++SAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+K HE+DPLQKPKQDRYALRTSPQWLGPQIEVIR +TK IEREIN
Sbjct:  199 VPLSYIAGLLTGRPNSKAVGPTGENLTAAEAFKLAGVDGGFFELQPKEGLALVNGTAVGSGMASMVLFETNILAVLAEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAEKQHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREIN 371          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PALY_DIGLA (Phenylalanine ammonia-lyase OS=Digitalis lanata PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.225e-77
Identity = 144/174 (82.76%), Postives = 158/174 (90.80%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFG---FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GPNGE ++A++A K AG     FFELQPKEGLALVNGTAVGSGLAS+ L+EAN L+LL+E++SA+FAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+K+HE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  203 VPLSYIAGLLTGRPNSKAVGPNGESLNAEQAFKLAGANSGLFFELQPKEGLALVNGTAVGSGLASIALYEANILSLLAEVMSAVFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKMHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRTATKMIEREIN 376          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL1_RUBID (Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=PAL1 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.225e-77
Identity = 145/173 (83.82%), Postives = 155/173 (89.60%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLL GRPNSK+ GP GE +   E  K AG   GFFELQPKEGLALVNGTAVGSG+ASMVLF+AN LA+LSE++SAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL+GSSYV  AKK+HE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  201 VPLSYIAGLLIGRPNSKSVGPKGETLSPAEGFKLAGIDGGFFELQPKEGLALVNGTAVGSGMASMVLFDANTLAVLSEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILEGSSYVKEAKKVHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREIN 373          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 1.599e-77
Identity = 146/173 (84.39%), Postives = 155/173 (89.60%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA G NG++++  EA   AG   GFFELQPKEGLALVNGTAVGSGLA+ VLFEAN LA++SE+LSAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  211 VPLSYIAGLLTGRPNSKAVGSNGQVLNPTEAFNLAGVTSGFFELQPKEGLALVNGTAVGSGLAATVLFEANILAIMSEVLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHETDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREIN 383          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL4_ARATH (Phenylalanine ammonia-lyase 4 OS=Arabidopsis thaliana GN=PAL4 PE=1 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 1.599e-77
Identity = 147/172 (85.47%), Postives = 156/172 (90.70%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFG-FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GP+GE + A EA K AG   FFELQPKEGLALVNGTAVGSGLAS VLF+AN LA+LSE++SA+FAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+ LHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  199 VPLSYIAGLLTGRPNSKAVGPSGETLTASEAFKLAGVSSFFELQPKEGLALVNGTAVGSGLASTVLFDANILAVLSEVMSAMFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKEAQLLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREIN 370          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 1.599e-77
Identity = 145/173 (83.82%), Postives = 157/173 (90.75%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSY+AGLL GRPNSK+ GPNG+I++A+EA + AG   GFFELQPKEGLALVNGTAVGSGLAS+ LFE N L +LSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS YV  A+K+H+IDPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  209 VPLSYVAGLLIGRPNSKSIGPNGQILNAKEAFQLAGIETGFFELQPKEGLALVNGTAVGSGLASLALFETNLLVVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSYYVKAAQKVHDIDPLQKPKQDRYALRTSPQWLGPQIEVIRNATKMIEREIN 381          
The following BLAST results are available for this feature:
BLAST of CF510252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
PAL1_PRUAV1.889e-7885.55Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]
PAL3_PETCR4.209e-7884.39Phenylalanine ammonia-lyase 3 OS=Petroselinum cris... [more]
PALY_TRISU5.497e-7885.55Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PAL2_POPKI5.497e-7886.13Phenylalanine ammonia-lyase G2B OS=Populus kitakam... [more]
PAL1_DAUCA5.497e-7884.97Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PALY_DIGLA1.225e-7782.76Phenylalanine ammonia-lyase OS=Digitalis lanata PE... [more]
PAL1_RUBID1.225e-7783.82Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=P... [more]
PALY_CITLI1.599e-7784.39Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PAL4_ARATH1.599e-7785.47Phenylalanine ammonia-lyase 4 OS=Arabidopsis thali... [more]
PAL2_CICAR1.599e-7783.82Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_123000-869 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-67_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510252 ID=CF510252; Name=CF510252; organism=Citrus sinensis; type=EST; length=513bp
GTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAA
GGCCACCGGGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAAC
AAGCGGGTTTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTT
GTCAATGGCACTGCTGTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGA
GGCTAACAACCTTGCTCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTG
AAGTCATGCAAGGCAAACCTGAGTTCACCGATCACTTGACACACAAATTG
AAGCACCATCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACATATCCT
CGATGGCAGCTCTTATGTTAACGTGGCTAAGAAGTTGCATGAGATTGATC
CTCTGCAGAAGCCGAAACAGGATCGTTATGCCCTGAGAACTTCACCACAA
TGGCTCGGCCCTCAGATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGA
ACGGGAGATCAAC
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