CF510252

Overview
NameCF510252
Unique NameCF510252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL2_LITER (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 2.089e-77
Identity = 144/173 (83.24%), Postives = 156/173 (90.17%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GP GE ++A+EA + AG   GFFELQPKEGLALVNGTAVGSG+ASMVL+EAN L ++SE+LSA+FAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS YV  A+ LHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  196 VPLSYIAGLLTGRPNSKAVGPTGEKLNAEEAFRLAGISSGFFELQPKEGLALVNGTAVGSGMASMVLYEANILGVMSEVLSAVFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSGYVKAAELLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSATKMIEREIN 368          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL1_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 4.653e-77
Identity = 145/173 (83.82%), Postives = 157/173 (90.75%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GPNGE ++A+EA   AG   GFFELQPKEGLALVNGTAVGS +AS+VLFE+N  A++SE+LSAIF EVM GKPEFTD+LTHKLKHHPGQIEAAAIMEHILDGSSYV VA+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  195 VPLSYIAGLLTGRPNSKAVGPNGEKLNAEEAFCVAGISGGFFELQPKEGLALVNGTAVGSAMASIVLFESNIFAVMSEVLSAIFTEVMNGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYVKVAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREIN 367          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL1_POPKI (Phenylalanine ammonia-lyase G1 OS=Populus kitakamiensis GN=PALG1 PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 6.078e-77
Identity = 148/173 (85.55%), Postives = 156/173 (90.17%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPL+YIAGLLTGR NSKA GPNGE + + EA  QAG   GFFELQPKEGLALVNGTAVGSGLASMVLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV  A+KL EIDPLQKPKQDRYALRTSPQWLGP IEVIR +TK IEREIN
Sbjct:  173 VPLAYIAGLLTGRHNSKAVGPNGEPLTSTEAFTQAGINGGFFELQPKEGLALVNGTAVGSGLASMVLFEANVLAILSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKEAQKLLEIDPLQKPKQDRYALRTSPQWLGPLIEVIRTSTKMIEREIN 345          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL2_SOLTU (Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanum tuberosum GN=PAL-2 PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 1.354e-76
Identity = 144/173 (83.24%), Postives = 156/173 (90.17%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GP G  +DA+EA + AG   GFFELQPKEGLALVNGTAVGS +AS+VLFE+N LA++ E+LSAIFAEVM GKPEFTD+LTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  214 VPLSYIAGLLTGRPNSKAVGPTGSKLDAEEAFRVAGVTGGFFELQPKEGLALVNGTAVGSAMASIVLFESNILAVMFEVLSAIFAEVMNGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREIN 386          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 2.309e-76
Identity = 140/173 (80.92%), Postives = 157/173 (90.75%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSY+AG+LTGRPNSKA  PNG  +DA  A + AG   GFF+LQPKEGLALVNGTAVGSG+AS+VLFE N LA+++E+LSA+F EVMQGKPEFTDHLTHKLKHHPGQIEAAA+MEHIL+GSSY+ +AKKLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATKSIEREIN
Sbjct:  195 VPLSYLAGILTGRPNSKARTPNGSTVDATTAFRLAGISSGFFDLQPKEGLALVNGTAVGSGVASIVLFETNILAVMAELLSALFCEVMQGKPEFTDHLTHKLKHHPGQIEAAAVMEHILEGSSYMKMAKKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREIN 367          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PALY_PERAE (Phenylalanine ammonia-lyase OS=Persea americana GN=PAL PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 5.145e-76
Identity = 147/174 (84.48%), Postives = 157/174 (90.23%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRY-ALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAG+LTGRPNSK   P+G+ IDA EA + AG   GFFELQPKEGLALVNGTAVGSGLASMVLFEAN L++LSE++SAIF EVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY+ VAKKLHE+DPLQKPKQD Y ALRTSPQWLGPQIEVIR AT SIEREIN
Sbjct:  110 VPLSYIAGMLTGRPNSKGDWPDGKEIDAGEAFRLAGIPSGFFELQPKEGLALVNGTAVGSGLASMVLFEANVLSVLSEVISAIFCEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKVAKKLHELDPLQKPKQDPYAALRTSPQWLGPQIEVIRNATLSIEREIN 283          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 8.776e-76
Identity = 142/173 (82.08%), Postives = 156/173 (90.17%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGLLTGRPNSKA GP+G  +DA EA + A    GFFELQPKEGLALVNGTAVGSG+AS+VL+++N LA++ E+LSAIFAEVM GKPEFTD+LTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  211 VPLSYIAGLLTGRPNSKAVGPSGSKLDADEAFRVAAVSGGFFELQPKEGLALVNGTAVGSGMASIVLYDSNILAVMFEVLSAIFAEVMNGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREIN 383          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PALY_WHEAT (Phenylalanine ammonia-lyase OS=Triticum aestivum GN=PAL PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 2.553e-75
Identity = 142/173 (82.08%), Postives = 155/173 (89.60%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAGL+TGRPNS AT P+G  ++A EA K AG   GFFELQPKEGLA+VNGTAVGSGLASMVLFEAN L+LL+E+LS +F EVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHIL+GSSY+ +AKKL E+DPL KPKQDRYALRTSPQWLGPQIEVIR ATKSIEREIN
Sbjct:  191 VPLSYIAGLVTGRPNSMATAPDGSKVNAAEAFKIAGIQHGFFELQPKEGLAMVNGTAVGSGLASMVLFEANVLSLLAEVLSGVFCEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMMLAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREIN 363          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL1_PHAVU (Phenylalanine ammonia-lyase class 1 (Fragment) OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 2.553e-75
Identity = 141/169 (83.43%), Postives = 155/169 (91.72%), Query Frame = 1
Query:   13 YIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFG--FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            YIAGLLTGRPNSKA GP+G ++ A++A + A     F+ELQPKEGLALVNGTAVGSG+AS+VLF+AN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY+  AKKLHEIDPLQKPKQDRYALRTSPQWLGP IEVIRF+TKSIEREIN
Sbjct:    1 YIAGLLTGRPNSKAVGPSGVVLTAKQAFELANINSEFYELQPKEGLALVNGTAVGSGMASIVLFDANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKDAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREIN 169          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: PAL3_ARATH (Phenylalanine ammonia-lyase 3 OS=Arabidopsis thaliana GN=PAL3 PE=1 SV=3)

HSP 1 Score: 272.707 bits (696), Expect = 6.954e-73
Identity = 139/172 (80.81%), Postives = 150/172 (87.21%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFG-FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPLSYIAG L GRPNS++ GP+GEI+ A EA K AG   FFEL+PKEGLALVNGTAVGS LAS VL++AN L + SE+ SA+FAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A  LH+IDPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREIN
Sbjct:  196 VPLSYIAGFLIGRPNSRSVGPSGEILTALEAFKLAGVSSFFELRPKEGLALVNGTAVGSALASTVLYDANILVVFSEVASAMFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKEALHLHKIDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREIN 367          
The following BLAST results are available for this feature:
BLAST of CF510252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
PAL2_LITER2.089e-7783.24Phenylalanine ammonia-lyase 2 OS=Lithospermum eryt... [more]
PAL1_SOLLC4.653e-7783.82Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL1_POPKI6.078e-7785.55Phenylalanine ammonia-lyase G1 OS=Populus kitakami... [more]
PAL2_SOLTU1.354e-7683.24Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanu... [more]
PALY_BROFI2.309e-7680.92Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
PALY_PERAE5.145e-7684.48Phenylalanine ammonia-lyase OS=Persea americana GN... [more]
PAL1_SOLTU8.776e-7682.08Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PALY_WHEAT2.553e-7582.08Phenylalanine ammonia-lyase OS=Triticum aestivum G... [more]
PAL1_PHAVU2.553e-7583.43Phenylalanine ammonia-lyase class 1 (Fragment) OS=... [more]
PAL3_ARATH6.954e-7380.81Phenylalanine ammonia-lyase 3 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_123000-869 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-67_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510252 ID=CF510252; Name=CF510252; organism=Citrus sinensis; type=EST; length=513bp
GTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAA
GGCCACCGGGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAAC
AAGCGGGTTTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTT
GTCAATGGCACTGCTGTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGA
GGCTAACAACCTTGCTCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTG
AAGTCATGCAAGGCAAACCTGAGTTCACCGATCACTTGACACACAAATTG
AAGCACCATCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACATATCCT
CGATGGCAGCTCTTATGTTAACGTGGCTAAGAAGTTGCATGAGATTGATC
CTCTGCAGAAGCCGAAACAGGATCGTTATGCCCTGAGAACTTCACCACAA
TGGCTCGGCCCTCAGATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGA
ACGGGAGATCAAC
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