CF510252

Overview
NameCF510252
Unique NameCF510252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_KLEP3 (Histidine ammonia-lyase OS=Klebsiella pneumoniae (strain 342) GN=hutH PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.969e-15
Identity = 56/170 (32.94%), Postives = 86/170 (50.59%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++  L G   ++  G  GE + A +A +QAG     L  KEGLAL+NGT   +  A   LFEA +L   + +  A+  E   G     D   H+++   GQI+AAA+  H+L   S   +++  H    +Q P    Y+LR  PQ +G  +  IR A + +  E N
Sbjct:  149 PLAHMSLTLLGEGKARVRG--GEWLPATDALRQAGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDS--AISRSHHNCTKVQDP----YSLRCQPQVMGACLTQIRQAAEVLLAEAN 310          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_RHOSK (Histidine ammonia-lyase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=hutH PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.065e-15
Identity = 55/170 (32.35%), Postives = 84/170 (49.41%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++A ++ G   ++     G  +    A   AG     L PKEGLAL+NGT   +  A   LFE    A  + ++SA+  + + G         H L+ H GQIEAAA M  +L+GS+   + +   E D   +  QD Y +R  PQ  G  ++V+R A  ++  E N
Sbjct:  147 PLAHMAAVMIGEGEAEV---GGRRLPGAAALAHAGLAPVALGPKEGLALINGTQFSTAYALAGLFEGWRAAQAALVISALSTDAIMGSTAPLRPEIHALRGHAGQIEAAATMRALLEGSA---IRESHREGD---QRVQDPYCIRCQPQVTGAAMDVLRMAAGTLATEAN 307          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_VIBPA (Histidine ammonia-lyase OS=Vibrio parahaemolyticus GN=hutH PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.639e-15
Identity = 54/170 (31.76%), Postives = 86/170 (50.59%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G   ++    NG+I+   EA K AG     L PKEGLAL+NGT   +  A   LF A +L   + +  A+  E   G     D   H+++ H   ++AA    H+LD SS      ++ E     +  QD Y+LR  PQ +G  ++ IR + + ++ E N
Sbjct:  149 PLAHMSTVLLGEGQARH---NGQIVSGYEALKIAGLEPITLAPKEGLALLNGTQASTAFALEGLFIAEDLFASATVCGAMSVEAALGSRRPFDPRIHRVRGHRSTMDAAMAYRHLLDTSS------EIGESHTNCEKVQDPYSLRCQPQVMGACLQQIRNSAEVLQVEAN 309          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_SHEPW (Histidine ammonia-lyase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=hutH PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.639e-15
Identity = 53/150 (35.33%), Postives = 75/150 (50.00%), Query Frame = 1
Query:   67 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPK-QDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            G++I A E  + AG    EL  KEGLAL+NGT   + LA   LF A +L   S ++ A+  E   G     D   H  +   GQI++AA+  H+L   S ++       +D +   K QD Y+LR  PQ LG  +  IR A + +  E N
Sbjct:  167 GQLITAAEGLEIAGLKPLELAAKEGLALLNGTQASTALALEGLFNAEDLFAASSVIGAMSVEAAMGSRSPFDSRIHAARGQKGQIDSAAVFRHLLGDESEIS-------LDHVNCEKVQDPYSLRCQPQVLGACLTQIRHAAEVLGTEAN 309          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_PHEZH (Histidine ammonia-lyase OS=Phenylobacterium zucineum (strain HLK1) GN=hutH PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.639e-15
Identity = 56/170 (32.94%), Postives = 83/170 (48.82%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++A  + G    +  G     + A EA   AG     L PKEGLAL+NGT   +  A   LFEA  L   + +  A+  E  +G     D   H L+  PGQ+EAA  +  ++ GS+    A  L + + +Q P    Y LR  PQ +G  ++V+R A  ++  E N
Sbjct:  148 PLAHMAAAMLGVGEIETAGQR---LPAGEALAAAGLAPLALGPKEGLALLNGTQFSTANALAGLFEAERLFRSALVTGALSTEAAKGSDTPFDARIHALRRQPGQVEAARALRELMAGSAI--RASHLKDDERVQDP----YCLRCQPQVMGAALDVLRQAAATLGFEAN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_KLEP7 (Histidine ammonia-lyase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hutH PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.639e-15
Identity = 55/170 (32.35%), Postives = 85/170 (50.00%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++  L G   ++  G  G+ + A EA +Q G     L  KEGLAL+NGT   +  A   LFEA +L   + +  A+  E   G     D   H+++   GQI+AAA+  H+L   S   +++  H    +Q P    Y+LR  PQ +G  +  IR A + +  E N
Sbjct:  149 PLAHMSLTLLGEGKARVRG--GDWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDS--AISQSHHNCSKVQDP----YSLRCQPQVMGACLTQIRQAAEVLLAEAN 310          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_CAUCR (Histidine ammonia-lyase OS=Caulobacter crescentus GN=hutH PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.639e-15
Identity = 57/170 (33.53%), Postives = 82/170 (48.24%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PLS++A  + G          G+ + A +A  QAG     L PKEGLAL+NGT   +  A   LFEA  L   + +  A+  E  +G     D   H L+ H GQIE AA +  ++  S     A  L E + +Q P    Y LR  PQ +G  ++++R A  ++  E N
Sbjct:  148 PLSHMAATMIGVGEIFV---GGQRLPAAQALAQAGLEPLTLGPKEGLALLNGTQFSTANALAGLFEAERLFQSALVTGALSTEAAKGSDTPFDPRIHTLRRHVGQIETAAALRALMSASEI--RASHLKEDERVQDP----YCLRCQPQVMGAALDILRQAATTLATEAN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_CAUCN (Histidine ammonia-lyase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=hutH PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.639e-15
Identity = 57/170 (33.53%), Postives = 82/170 (48.24%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PLS++A  + G          G+ + A +A  QAG     L PKEGLAL+NGT   +  A   LFEA  L   + +  A+  E  +G     D   H L+ H GQIE AA +  ++  S     A  L E + +Q P    Y LR  PQ +G  ++++R A  ++  E N
Sbjct:  152 PLSHMAATMIGVGEIFV---GGQRLPAAQALAQAGLEPLTLGPKEGLALLNGTQFSTANALAGLFEAERLFQSALVTGALSTEAAKGSDTPFDPRIHTLRRHVGQIETAAALRALMSASEI--RASHLKEDERVQDP----YCLRCQPQVMGAALDILRQAATTLATEAN 312          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_SHEWM (Histidine ammonia-lyase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=hutH PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.128e-14
Identity = 57/170 (33.53%), Postives = 83/170 (48.82%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PLS+++  L G          G+I+ A+E  + AG    EL  KEGLAL+NGT   + LA   LF A +L   S ++ A+  E   G     D   H  +   GQ++AA +  H+L   S ++    L  +D   +  QD Y+LR  PQ LG  +  IR A + +  E N
Sbjct:  149 PLSHMSLTLLGEGE---VSYKGQIMSAKEGLEIAGLEPIELAAKEGLALLNGTQASTALALEGLFNAEDLFAASSVIGAMSVEAAMGSRSPFDPRIHAARGQKGQMDAAGLFRHLLGDESEIS----LSHVD--CEKVQDPYSLRCQPQVLGACLTQIRQAAEVLGTEAN 309          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_STRSV (Histidine ammonia-lyase OS=Streptococcus sanguinis (strain SK36) GN=hutH PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.474e-14
Identity = 49/149 (32.89%), Postives = 75/149 (50.34%), Query Frame = 1
Query:   67 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            G+++  QEA  +AG     L  KEGLAL+NGT V +G+ ++  ++A  L  LS++  A+  EV  G     +   H ++   GQ+  A  + ++L+GS    VA         Q+  QD Y LR  PQ  G   + I +    +E EIN
Sbjct:  168 GQLLSGQEALDKAGIEKIALAAKEGLALINGTTVLTGIGALATYDAIQLLKLSDVAGALSMEVHNGITSPFEEDLHTIRPQSGQLATARNIRNLLEGSGNTTVA--------TQQRVQDPYTLRCIPQIHGASKDSIAYVKTKVEIEIN 308          
The following BLAST results are available for this feature:
BLAST of CF510252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
HUTH_KLEP32.969e-1532.94Histidine ammonia-lyase OS=Klebsiella pneumoniae (... [more]
HUTH_RHOSK5.065e-1532.35Histidine ammonia-lyase OS=Rhodobacter sphaeroides... [more]
HUTH_VIBPA8.639e-1531.76Histidine ammonia-lyase OS=Vibrio parahaemolyticus... [more]
HUTH_SHEPW8.639e-1535.33Histidine ammonia-lyase OS=Shewanella piezotoleran... [more]
HUTH_PHEZH8.639e-1532.94Histidine ammonia-lyase OS=Phenylobacterium zucine... [more]
HUTH_KLEP78.639e-1532.35Histidine ammonia-lyase OS=Klebsiella pneumoniae s... [more]
HUTH_CAUCR8.639e-1533.53Histidine ammonia-lyase OS=Caulobacter crescentus ... [more]
HUTH_CAUCN8.639e-1533.53Histidine ammonia-lyase OS=Caulobacter crescentus ... [more]
HUTH_SHEWM1.128e-1433.53Histidine ammonia-lyase OS=Shewanella woodyi (stra... [more]
HUTH_STRSV1.474e-1432.89Histidine ammonia-lyase OS=Streptococcus sanguinis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_123000-869 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-67_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510252 ID=CF510252; Name=CF510252; organism=Citrus sinensis; type=EST; length=513bp
GTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAA
GGCCACCGGGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAAC
AAGCGGGTTTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTT
GTCAATGGCACTGCTGTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGA
GGCTAACAACCTTGCTCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTG
AAGTCATGCAAGGCAAACCTGAGTTCACCGATCACTTGACACACAAATTG
AAGCACCATCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACATATCCT
CGATGGCAGCTCTTATGTTAACGTGGCTAAGAAGTTGCATGAGATTGATC
CTCTGCAGAAGCCGAAACAGGATCGTTATGCCCTGAGAACTTCACCACAA
TGGCTCGGCCCTCAGATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGA
ACGGGAGATCAAC
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