CF510252

Overview
NameCF510252
Unique NameCF510252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_STRGC (Histidine ammonia-lyase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=hutH PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.474e-14
Identity = 49/149 (32.89%), Postives = 75/149 (50.34%), Query Frame = 1
Query:   67 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            G+++  QEA  +AG     L  KEGLAL+NGT V +G+ ++  ++A  L  LS++  A+  EV  G     +   H ++   GQ+  A  + ++L+GS    VA         Q+  QD Y LR  PQ  G   + I +    +E EIN
Sbjct:  168 GQLLSGQEALDKAGIEKIALAAKEGLALINGTTVLTGIGALATYDAIQLLKLSDVAGALSMEVHNGITSPFEEDLHTIRPQSGQLATARNIRNLLEGSGNTTVA--------TQQRVQDPYTLRCIPQIHGASKDSIAYVKTKVEIEIN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_VIBVY (Histidine ammonia-lyase OS=Vibrio vulnificus (strain YJ016) GN=hutH PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.925e-14
Identity = 55/170 (32.35%), Postives = 85/170 (50.00%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G   ++    NG+II   EA K AG     L PKEGLAL+NGT   +  A   LF A +L   + +  A+  E   G     D   H+++ H  Q+++A    H+LD SS +  +    E        QD Y+LR  PQ +G  ++ IR + + +  E N
Sbjct:  151 PLAHMSTVLLGEGQARH---NGKIISGLEALKIAGLEPITLAPKEGLALLNGTQASTAFALEGLFIAEDLFASATVCGAMSVEAALGSRRPFDPRIHRVRGHRSQMDSAMAYRHLLDTSSEIGQSHSNCE------KVQDPYSLRCQPQVMGACLQQIRNSAEILLVESN 311          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_VIBVU (Histidine ammonia-lyase OS=Vibrio vulnificus GN=hutH PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.925e-14
Identity = 55/170 (32.35%), Postives = 85/170 (50.00%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G   ++    NG+II   EA K AG     L PKEGLAL+NGT   +  A   LF A +L   + +  A+  E   G     D   H+++ H  Q+++A    H+LD SS +  +    E        QD Y+LR  PQ +G  ++ IR + + +  E N
Sbjct:  151 PLAHMSTVLLGEGQARH---NGKIISGLEALKIAGLEPITLAPKEGLALLNGTQASTAFALEGLFIAEDLFASATVCGAMSVEAALGSRRPFDPRIHRVRGHRSQMDSAMAYRHLLDTSSEIGQSHSNCE------KVQDPYSLRCQPQVMGACLQQIRNSAEILLVESN 311          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH2_FUSNN (Histidine ammonia-lyase 2 OS=Fusobacterium nucleatum subsp. nucleatum GN=hutH2 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.514e-14
Identity = 47/149 (31.54%), Postives = 77/149 (51.68%), Query Frame = 1
Query:   67 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            GEI+  +EA K+AG     L+ KEGLAL+NGT    G A + +++A  L   ++I++++  + + G  +  D   H ++ H GQI +A  +  +L GS               +K  QD Y+LR +PQ  G       +  +++E EIN
Sbjct:  168 GEILSGKEAMKKAGVSTITLKAKEGLALINGTQAMMGNAVLAVYDAEKLLKQADIVASLSIDALGGIIDAFDERIHLIRPHKGQIYSAENLRKLLKGSKRTTRQG--------EKRMQDAYSLRCTPQVHGASRLAFDYVKQTVETEIN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_VIBF1 (Histidine ammonia-lyase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=hutH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.283e-14
Identity = 53/170 (31.18%), Postives = 86/170 (50.59%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G   ++     GE+I  + A + AG     L PKEGLAL+NGT   +  A   LF A +L   + +  A+  E   G  +  D   H+++ H  Q++AA    H+L  SS + ++ +  E        QD Y+LR  PQ +G  ++ IR +   +E E N
Sbjct:  149 PLAHMSTVLLGEGEARY---RGEVITGKTALEIAGLTPITLAPKEGLALLNGTQASTAFALEGLFAAEDLYASATVCGAMSVEAALGSRKPFDPRIHRVRGHRSQMDAALAYRHLLAQSSDIGLSHQCCE------RVQDPYSLRCQPQVMGACLQQIRNSADILEIEAN 309          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_STRPZ (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=hutH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.283e-14
Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = 1
Query:   67 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            GE++  QEA  +AG     L  KEGLAL+NGT V + + ++  ++A  L  LS++  A+  EV  G     +   H ++   GQ+  A  + ++L+GS    VA         Q   QD Y LR  PQ  G   + I +    ++ EIN
Sbjct:  168 GELLSGQEALDKAGIDKISLAAKEGLALINGTTVLTAIGALATYDAIQLLKLSDLAGALSLEVHNGITSPFEENLHTIRPQSGQLATARNIRNLLEGSQNTTVA--------TQSRVQDPYTLRCMPQIHGASKDSIAYVKSKVDIEIN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_STRP8 (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M18 GN=hutH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.283e-14
Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = 1
Query:   67 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            GE++  QEA  +AG     L  KEGLAL+NGT V + + ++  ++A  L  LS++  A+  EV  G     +   H ++   GQ+  A  + ++L+GS    VA         Q   QD Y LR  PQ  G   + I +    ++ EIN
Sbjct:  168 GELLSGQEALDKAGIDKISLAAKEGLALINGTTVLTAIGALATYDAIQLLKLSDLAGALSLEVHNGITSPFEENLHTIRPQSGQLATARNIRNLLEGSQNTTVA--------TQSRVQDPYTLRCMPQIHGASKDSIAYVKSKVDIEIN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_SILPO (Histidine ammonia-lyase OS=Silicibacter pomeroyi GN=hutH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.283e-14
Identity = 55/170 (32.35%), Postives = 84/170 (49.41%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++  ++ G   ++     G+ +   EA  +AG     L PKEGLA +NGT   +  A   LF A   A  S + +A+  + + G         H L+ H GQI+AAA M  +LDGS    + +   E D      QD Y +R  PQ  G  ++V+R A +++E E N
Sbjct:  149 PLAHMTAVIIGAGEAEY---QGQRLPGAEALARAGLTPIALGPKEGLAFINGTQFSTAFALAGLFGAWRAATSSLVTAALSTDAIMGSTAPLQPEIHALRGHRGQIDAAARMRALLDGS---EIRESHREGD---TRVQDPYCIRCQPQVTGAAMDVLRQAAQTLEIEAN 309          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_PHOLL (Histidine ammonia-lyase OS=Photorhabdus luminescens subsp. laumondii GN=hutH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.283e-14
Identity = 56/171 (32.75%), Postives = 87/171 (50.88%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPK-QDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ LL G   ++     GE + A+EA  +A      L  KEGLAL+NGT V +  A   LFEA +L   + +  ++  E   G  +  D   H ++   GQI+ AA+  H+L+ SS ++ +        +  PK QD Y+LR  PQ +G  +  +R A   I  E N
Sbjct:  149 PLAHMSLLLLGEGQARY---QGEWLPAKEALAKANLQPITLAAKEGLALLNGTQVSTAFALRGLFEAEDLLAAAIVCGSLSVEAALGSRKPFDARVHVVRGQQGQIDVAALYRHVLEESSELSDSH-------INCPKVQDPYSLRCQPQVMGACLTQLRHAADVILTEAN 309          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_STRP6 (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M6 GN=hutH PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 4.288e-14
Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = 1
Query:   67 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            GE++  QEA  +AG     L  KEGLAL+NGT V + + ++  ++A  L  LS++  A+  EV  G     +   H ++   GQ+  A  + ++L+GS    VA         Q   QD Y LR  PQ  G   + I +    ++ EIN
Sbjct:  168 GELLSGQEALDKAGIDKISLAAKEGLALINGTTVLTAIGALATYDAIQLLKLSDLAGALSLEVHNGITSPFEENLHTIRPQSGQLATARNIRNLLEGSQNTTVA--------TQSRVQDPYTLRCLPQIHGASKDSIAYVKSKVDIEIN 308          
The following BLAST results are available for this feature:
BLAST of CF510252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
HUTH_STRGC1.474e-1432.89Histidine ammonia-lyase OS=Streptococcus gordonii ... [more]
HUTH_VIBVY1.925e-1432.35Histidine ammonia-lyase OS=Vibrio vulnificus (stra... [more]
HUTH_VIBVU1.925e-1432.35Histidine ammonia-lyase OS=Vibrio vulnificus GN=hu... [more]
HUTH2_FUSNN2.514e-1431.54Histidine ammonia-lyase 2 OS=Fusobacterium nucleat... [more]
HUTH_VIBF13.283e-1431.18Histidine ammonia-lyase OS=Vibrio fischeri (strain... [more]
HUTH_STRPZ3.283e-1432.21Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]
HUTH_STRP83.283e-1432.21Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]
HUTH_SILPO3.283e-1432.35Histidine ammonia-lyase OS=Silicibacter pomeroyi G... [more]
HUTH_PHOLL3.283e-1432.75Histidine ammonia-lyase OS=Photorhabdus luminescen... [more]
HUTH_STRP64.288e-1432.21Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_123000-869 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-67_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510252 ID=CF510252; Name=CF510252; organism=Citrus sinensis; type=EST; length=513bp
GTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAA
GGCCACCGGGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAAC
AAGCGGGTTTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTT
GTCAATGGCACTGCTGTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGA
GGCTAACAACCTTGCTCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTG
AAGTCATGCAAGGCAAACCTGAGTTCACCGATCACTTGACACACAAATTG
AAGCACCATCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACATATCCT
CGATGGCAGCTCTTATGTTAACGTGGCTAAGAAGTTGCATGAGATTGATC
CTCTGCAGAAGCCGAAACAGGATCGTTATGCCCTGAGAACTTCACCACAA
TGGCTCGGCCCTCAGATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGA
ACGGGAGATCAAC
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