CF510252

Overview
NameCF510252
Unique NameCF510252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_STRP1 (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M1 GN=hutH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.288e-14
Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = 1
Query:   67 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            GE++  QEA  +AG     L  KEGLAL+NGT V + + ++  ++A  L  LS++  A+  EV  G     +   H ++   GQ+  A  + ++L+GS    VA         Q   QD Y LR  PQ  G   + I +    ++ EIN
Sbjct:  168 GELLSGQEALDKAGIDKISLAAKEGLALINGTTVLTAVGALATYDAIQLLKLSDLAGALSLEVHNGITSPFEENLHTIRPQSGQLATARNIRNLLEGSQNTTVA--------TQSRVQDPYTLRCMPQIHGASKDSIAYVKSKVDIEIN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_LEGPA (Histidine ammonia-lyase OS=Legionella pneumophila (strain Paris) GN=hutH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.288e-14
Identity = 51/171 (29.82%), Postives = 86/171 (50.29%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPL++++  L G    +     G++I A+E  K AG    EL+ KEGLAL+NG  V + LA   LF +  L   + I  ++  +   G     D   H+++ H  QI AA++  ++L GS      +  + +       QD Y+LR  PQ +G  +  ++F  ++++ E N
Sbjct:  149 VPLAHLSLPLLGEGEVRH---QGQVISAEEGLKLAGLKPLELEAKEGLALLNGLQVSTALALSALFISETLFETAIISGSLSVDAASGSDVPFDDRIHQIRGHQAQISAASMYRNLLAGSQIRESHRHCNRV-------QDPYSLRCQPQIMGAVLHQMQFVGQTLQVEAN 309          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_TREDE (Histidine ammonia-lyase OS=Treponema denticola GN=hutH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 47/149 (31.54%), Postives = 75/149 (50.34%), Query Frame = 1
Query:   67 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            G++++ + A  +AG     L  K+GL ++NGT V SG+ ++ L +A  L   + + +++  E  +G     D   HK + H GQI+ AA +  +L GSS +N           +   QD Y LR  PQ  G   + I +  K +E EIN
Sbjct:  169 GKLMEGKAALAKAGLKPVVLSGKDGLGIINGTPVMSGIGALALHDAEQLLKAANMGASLVFEAFRGITAALDPRIHKSRPHKGQIDTAAFILKMLKGSSSINTR---------ENDVQDPYTLRCVPQVHGASADAIAYVRKVLEIEIN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_STRPG (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=hutH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 48/149 (32.21%), Postives = 72/149 (48.32%), Query Frame = 1
Query:   67 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            GE +  QEA  +AG     L  KEGLAL+NGT V + + ++  ++A  L  LS++  A+  EV  G     +   H ++   GQ+  A  + ++L+GS    VA         Q   QD Y LR  PQ  G   + I +    ++ EIN
Sbjct:  168 GEFLSGQEALDKAGIDKISLAAKEGLALINGTTVLTAIGALATYDAIQLLKLSDLAGALSLEVHNGITSPFEENLHTIRPQSGQLATARNIRNLLEGSQNTTVA--------TQSRVQDPYTLRCMPQIHGASKDSIAYVKSKVDIEIN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_LEGPH (Histidine ammonia-lyase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=hutH PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 51/171 (29.82%), Postives = 86/171 (50.29%), Query Frame = 1
Query:    1 VPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            VPL++++  L G    +     G++I A+E  K AG    EL+ KEGLAL+NG  V + LA   LF +  L   + I  ++  +   G     D   H+++ H  QI AA++  ++L GS      +  + +       QD Y+LR  PQ +G  +  ++F  ++++ E N
Sbjct:  149 VPLAHLSLPLLGEGEVRH---QGQVISAEEGLKLAGLKPLELEAKEGLALLNGLQVSTALALSALFISETLFETAIISGSLSVDAASGSDVPFDDRIHQIRGHQAQISAASMYRNLLAGSQIRESHRHCNRV-------QDPYSLRCQPQIMGAILHQMQFVGQTLQVEAN 309          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_GLOVI (Histidine ammonia-lyase OS=Gloeobacter violaceus GN=hutH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 54/171 (31.58%), Postives = 86/171 (50.29%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQG-KPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++A +LTG   ++     GE++    A  +AG     L  KEGLAL+NGT   S L ++ +  A  LA L+++  A+  E   G +  F  H  H+L+ HPGQ  +A  +  + + S+ +        +       QD Y+LR +PQ  G  ++ I +A   I  EIN
Sbjct:  153 PLAHLALVLTGEGEAEV---GGEVLPGAAALARAGLEPIRLGAKEGLALINGTQAMSALGALTVHRAQRLAKLADLACAMTLEATLGSRSAFLPHF-HRLRPHPGQQSSARNLLVLTEDSALIASHAGCDRV-------QDAYSLRCAPQVHGASLDAISYAAGVIAIEIN 312          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_BURPS (Histidine ammonia-lyase OS=Burkholderia pseudomallei GN=hutH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 57/170 (33.53%), Postives = 88/170 (51.76%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G  +       GE   A E  + AG     L+ KEGLAL+NGT   + LA   LF   +L   + +  A+  +   G  +  D   H+L+ H GQI+AAA    +LDGS+ +NV+ +  + D +Q P    Y+LR  PQ +G  ++ IR A   +  E N
Sbjct:  147 PLAHMSAVLLGIGDVFI---RGERASAAEGLRVAGLAPLTLEAKEGLALLNGTQASTALALDNLFAIEDLYRTALVSGALSVDAAAGSVKPFDARIHELRGHRGQIDAAAAYRSLLDGSA-INVSHR--DCDKVQDP----YSLRCQPQVMGACLDQIRHAAGVLLIEAN 306          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_BURP6 (Histidine ammonia-lyase OS=Burkholderia pseudomallei (strain 668) GN=hutH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 57/170 (33.53%), Postives = 88/170 (51.76%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G  +       GE   A E  + AG     L+ KEGLAL+NGT   + LA   LF   +L   + +  A+  +   G  +  D   H+L+ H GQI+AAA    +LDGS+ +NV+ +  + D +Q P    Y+LR  PQ +G  ++ IR A   +  E N
Sbjct:  147 PLAHMSAVLLGIGDVFI---RGERASAAEGLRVAGLAPLTLEAKEGLALLNGTQASTALALDNLFAIEDLYRTALVSGALSVDAAAGSVKPFDARIHELRGHRGQIDAAAAYRSLLDGSA-INVSHR--DCDKVQDP----YSLRCQPQVMGACLDQIRHAAGVLLIEAN 306          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_BURP0 (Histidine ammonia-lyase OS=Burkholderia pseudomallei (strain 1106a) GN=hutH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 57/170 (33.53%), Postives = 88/170 (51.76%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G  +       GE   A E  + AG     L+ KEGLAL+NGT   + LA   LF   +L   + +  A+  +   G  +  D   H+L+ H GQI+AAA    +LDGS+ +NV+ +  + D +Q P    Y+LR  PQ +G  ++ IR A   +  E N
Sbjct:  147 PLAHMSAVLLGIGDVFI---RGERASAAEGLRVAGLAPLTLEAKEGLALLNGTQASTALALDNLFAIEDLYRTALVSGALSVDAAAGSVKPFDARIHELRGHRGQIDAAAAYRSLLDGSA-INVSHR--DCDKVQDP----YSLRCQPQVMGACLDQIRHAAGVLLIEAN 306          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_BURMA (Histidine ammonia-lyase OS=Burkholderia mallei GN=hutH PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 57/170 (33.53%), Postives = 88/170 (51.76%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G  +       GE   A E  + AG     L+ KEGLAL+NGT   + LA   LF   +L   + +  A+  +   G  +  D   H+L+ H GQI+AAA    +LDGS+ +NV+ +  + D +Q P    Y+LR  PQ +G  ++ IR A   +  E N
Sbjct:  147 PLAHMSAVLLGIGDVFI---RGERASAAEGLRVAGLAPLTLEAKEGLALLNGTQASTALALDNLFAIEDLYRTALVSGALSVDAAAGSVKPFDARIHELRGHRGQIDAAAAYRSLLDGSA-INVSHR--DCDKVQDP----YSLRCQPQVMGACLDQIRHAAGVLLIEAN 306          
The following BLAST results are available for this feature:
BLAST of CF510252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
HUTH_STRP14.288e-1432.21Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]
HUTH_LEGPA4.288e-1429.82Histidine ammonia-lyase OS=Legionella pneumophila ... [more]
HUTH_TREDE5.600e-1431.54Histidine ammonia-lyase OS=Treponema denticola GN=... [more]
HUTH_STRPG5.600e-1432.21Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]
HUTH_LEGPH5.600e-1429.82Histidine ammonia-lyase OS=Legionella pneumophila ... [more]
HUTH_GLOVI5.600e-1431.58Histidine ammonia-lyase OS=Gloeobacter violaceus G... [more]
HUTH_BURPS5.600e-1433.53Histidine ammonia-lyase OS=Burkholderia pseudomall... [more]
HUTH_BURP65.600e-1433.53Histidine ammonia-lyase OS=Burkholderia pseudomall... [more]
HUTH_BURP05.600e-1433.53Histidine ammonia-lyase OS=Burkholderia pseudomall... [more]
HUTH_BURMA5.600e-1433.53Histidine ammonia-lyase OS=Burkholderia mallei GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_123000-869 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-67_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510252 ID=CF510252; Name=CF510252; organism=Citrus sinensis; type=EST; length=513bp
GTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAA
GGCCACCGGGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAAC
AAGCGGGTTTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTT
GTCAATGGCACTGCTGTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGA
GGCTAACAACCTTGCTCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTG
AAGTCATGCAAGGCAAACCTGAGTTCACCGATCACTTGACACACAAATTG
AAGCACCATCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACATATCCT
CGATGGCAGCTCTTATGTTAACGTGGCTAAGAAGTTGCATGAGATTGATC
CTCTGCAGAAGCCGAAACAGGATCGTTATGCCCTGAGAACTTCACCACAA
TGGCTCGGCCCTCAGATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGA
ACGGGAGATCAAC
back to top