CF510252

Overview
NameCF510252
Unique NameCF510252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_BURM9 (Histidine ammonia-lyase OS=Burkholderia mallei (strain NCTC 10229) GN=hutH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 57/170 (33.53%), Postives = 88/170 (51.76%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G  +       GE   A E  + AG     L+ KEGLAL+NGT   + LA   LF   +L   + +  A+  +   G  +  D   H+L+ H GQI+AAA    +LDGS+ +NV+ +  + D +Q P    Y+LR  PQ +G  ++ IR A   +  E N
Sbjct:  147 PLAHMSAVLLGIGDVFI---RGERASAAEGLRVAGLAPLTLEAKEGLALLNGTQASTALALDNLFAIEDLYRTALVSGALSVDAAAGSVKPFDARIHELRGHRGQIDAAAAYRSLLDGSA-INVSHR--DCDKVQDP----YSLRCQPQVMGACLDQIRHAAGVLLIEAN 306          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_BURM7 (Histidine ammonia-lyase OS=Burkholderia mallei (strain NCTC 10247) GN=hutH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.600e-14
Identity = 57/170 (33.53%), Postives = 88/170 (51.76%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G  +       GE   A E  + AG     L+ KEGLAL+NGT   + LA   LF   +L   + +  A+  +   G  +  D   H+L+ H GQI+AAA    +LDGS+ +NV+ +  + D +Q P    Y+LR  PQ +G  ++ IR A   +  E N
Sbjct:  147 PLAHMSAVLLGIGDVFI---RGERASAAEGLRVAGLAPLTLEAKEGLALLNGTQASTALALDNLFAIEDLYRTALVSGALSVDAAAGSVKPFDARIHELRGHRGQIDAAAAYRSLLDGSA-INVSHR--DCDKVQDP----YSLRCQPQVMGACLDQIRHAAGVLLIEAN 306          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_PSEAE (Histidine ammonia-lyase OS=Pseudomonas aeruginosa GN=hutH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.314e-14
Identity = 57/170 (33.53%), Postives = 83/170 (48.82%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G   ++     GE + A EA   AG     L  KEGLAL+NGT V +  A   LFEA +L   + +   +  E M G     D   H  +   GQI+ AA    +L  SS   VA+   + D +Q P    Y+LR  PQ +G  +  +R A + +E E N
Sbjct:  148 PLAHMSLVLIGESRARH---RGEWLPAAEALAVAGLEPLTLAAKEGLALLNGTQVSTAYALRGLFEAEDLFAAATVCGGLSVEAMLGSRAPFDARIHAARGQRGQIDVAAAYRDLLTASS--EVARSHEKCDKVQDP----YSLRCQPQVMGACLTQMRQAAEVLEIEAN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_PSEAB (Histidine ammonia-lyase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hutH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.314e-14
Identity = 57/170 (33.53%), Postives = 83/170 (48.82%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G   ++     GE + A EA   AG     L  KEGLAL+NGT V +  A   LFEA +L   + +   +  E M G     D   H  +   GQI+ AA    +L  SS   VA+   + D +Q P    Y+LR  PQ +G  +  +R A + +E E N
Sbjct:  148 PLAHMSLVLIGESRARH---RGEWLPAAEALAVAGLEPLTLAAKEGLALLNGTQVSTAYALRGLFEAEDLFAAATVCGGLSVEAMLGSRAPFDARIHAARGQRGQIDVAAAYRDLLTASS--EVARSHEKCDKVQDP----YSLRCQPQVMGACLTQMRQAAEVLEIEAN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_PSEA8 (Histidine ammonia-lyase OS=Pseudomonas aeruginosa (strain LESB58) GN=hutH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.314e-14
Identity = 57/170 (33.53%), Postives = 83/170 (48.82%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G   ++     GE + A EA   AG     L  KEGLAL+NGT V +  A   LFEA +L   + +   +  E M G     D   H  +   GQI+ AA    +L  SS   VA+   + D +Q P    Y+LR  PQ +G  +  +R A + +E E N
Sbjct:  148 PLAHMSLVLIGESRARH---RGEWLPAAEALAVAGLEPLTLAAKEGLALLNGTQVSTAYALRGLFEAEDLFAAATVCGGLSVEAMLGSRAPFDARIHAARGQRGQIDVAAAYRDLLTASS--EVARSHEKCDKVQDP----YSLRCQPQVMGACLTQMRQAAEVLEIEAN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_CITK8 (Histidine ammonia-lyase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=hutH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.314e-14
Identity = 55/170 (32.35%), Postives = 85/170 (50.00%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++  L G   ++     GE + A+EA K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+AA +  H+L  +S   +A+  H  + +Q P    Y+LR  PQ +G  +  +R A + +  E N
Sbjct:  149 PLAHMSLTLLGEGKARW---QGEWLPAKEALKKAGLEPITLAAKEGLALLNGTQASTAFALRGLFEAQALFASAVVCGALTTEAVLGSRRPFDARIHAARGQRGQIDAAGLFRHVLTETS--AIAQSHHNCEKVQDP----YSLRCQPQVMGACLTQLRQAMEVLLVEAN 309          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_CAUSK (Histidine ammonia-lyase OS=Caulobacter sp. (strain K31) GN=hutH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.314e-14
Identity = 54/170 (31.76%), Postives = 82/170 (48.24%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++A  + G          G+ + A +A  +AG     L PKEGLAL+NGT   +  A   LF+A  L   + +  A+  E  +G     D   H L+  PGQIE AA +  ++ GS+   +     E D      QD Y LR  PQ +G  ++++R A  ++  E N
Sbjct:  148 PLAHMAATMIGVGEIFV---EGQRLPAVQALMEAGLKPLTLGPKEGLALLNGTQFSTANALAALFDAERLFQSALVTGALATEAAKGSDTPFDPRIHTLRRQPGQIETAAALRALMAGSA---IRDSHREGD---TRVQDPYCLRCQPQVMGAALDILRQAAVTLSTEAN 308          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_ACIAC (Histidine ammonia-lyase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=hutH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.314e-14
Identity = 54/173 (31.21%), Postives = 85/173 (49.13%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKP---KQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++A +L G   ++     G I+  +EA    G   F L PKEGLAL+NGT V + LA   LF A N+     +   +  E ++G  +  D   H+ +   GQI  AA +  +L+GS+          IDP        QD Y++R  PQ +G  ++ +  A + ++ E N
Sbjct:  152 PLAHLACVLIGEGAAQV---GGRIVTGREAMAAVGLEPFVLGPKEGLALLNGTQVSTALALAGLFAAENVFAAGLVSGCLTLEAIKGSVKPFDARIHEARGQAGQIAVAAAVRALLEGSA----------IDPSHPDCGRVQDPYSIRCVPQVMGACLDNLSHAARVLQIEAN 311          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_VIBFM (Histidine ammonia-lyase OS=Vibrio fischeri (strain MJ11) GN=hutH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.552e-14
Identity = 53/170 (31.18%), Postives = 85/170 (50.00%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL++++ +L G   ++      +II  +EA   AG     L PKEGLAL+NGT   +  A   LF A +L   + +  A+  E   G  +  D   H+++ H  Q++AA    H+L  SS + ++ +  E        QD Y+LR  PQ +G  ++ IR +   +E E N
Sbjct:  149 PLAHMSTVLLGEGEARY---QDKIISGKEALDIAGLTPITLAPKEGLALLNGTQASTAFALEGLFAAEDLYASATVCGAMSVEAALGSRKPFDPRIHRVRGHRSQMDAALAYRHLLAQSSEIGLSHQCCE------RVQDPYSLRCQPQVMGACLQQIRNSADILEIEAN 309          
BLAST of CF510252 vs. ExPASy Swiss-Prot
Match: HUTH_SORC5 (Histidine ammonia-lyase OS=Sorangium cellulosum (strain So ce56) GN=hutH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.552e-14
Identity = 49/170 (28.82%), Postives = 83/170 (48.82%), Query Frame = 1
Query:    4 PLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN 513
            PL+++A  L G   ++     G+++ +  A  +AG    EL  KEGLAL+NGT   + L ++ L +A  L  +++I  A+  E + G     D    +++ HPGQ   A  +  +L GS  +        +       QD Y+LR  PQ  G   + + +A + + RE+N
Sbjct:  148 PLAHLALTLIGEGEARF---EGQLLPSAVALAKAGLAPIELAAKEGLALINGTQYMTALGALALRDAAALCTVADIAGAVSLEALMGSKRPFDERLMRVRPHPGQAGTAGNLRALLGGSEIMQSHADCPRV-------QDAYSLRCMPQVHGATRDAVAWAAEVLTREVN 307          
The following BLAST results are available for this feature:
BLAST of CF510252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
HUTH_BURM95.600e-1433.53Histidine ammonia-lyase OS=Burkholderia mallei (st... [more]
HUTH_BURM75.600e-1433.53Histidine ammonia-lyase OS=Burkholderia mallei (st... [more]
HUTH_PSEAE7.314e-1433.53Histidine ammonia-lyase OS=Pseudomonas aeruginosa ... [more]
HUTH_PSEAB7.314e-1433.53Histidine ammonia-lyase OS=Pseudomonas aeruginosa ... [more]
HUTH_PSEA87.314e-1433.53Histidine ammonia-lyase OS=Pseudomonas aeruginosa ... [more]
HUTH_CITK87.314e-1432.35Histidine ammonia-lyase OS=Citrobacter koseri (str... [more]
HUTH_CAUSK7.314e-1431.76Histidine ammonia-lyase OS=Caulobacter sp. (strain... [more]
HUTH_ACIAC7.314e-1431.21Histidine ammonia-lyase OS=Acidovorax avenae subsp... [more]
HUTH_VIBFM9.552e-1431.18Histidine ammonia-lyase OS=Vibrio fischeri (strain... [more]
HUTH_SORC59.552e-1428.82Histidine ammonia-lyase OS=Sorangium cellulosum (s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_123000-869 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-67_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510252 ID=CF510252; Name=CF510252; organism=Citrus sinensis; type=EST; length=513bp
GTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAA
GGCCACCGGGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAAC
AAGCGGGTTTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTT
GTCAATGGCACTGCTGTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGA
GGCTAACAACCTTGCTCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTG
AAGTCATGCAAGGCAAACCTGAGTTCACCGATCACTTGACACACAAATTG
AAGCACCATCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACATATCCT
CGATGGCAGCTCTTATGTTAACGTGGCTAAGAAGTTGCATGAGATTGATC
CTCTGCAGAAGCCGAAACAGGATCGTTATGCCCTGAGAACTTCACCACAA
TGGCTCGGCCCTCAGATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGA
ACGGGAGATCAAC
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