CF510256

Overview
NameCF510256
Unique NameCF510256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9654 contig Csv1_Contig9654:570..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 2.186e-95
Identity = 171/187 (91.44%), Postives = 181/187 (96.79%), Query Frame = 1 
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLAS+VLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV  AKKLHE+DPLQKPKQDRYALRTSPQWLGP IEVIRF+TKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKL+FAQFSELVNDFYNNGLPSNLS  RNP+
Sbjct:  271 VGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPS 457
[Close]
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 3.728e-95
Identity = 170/187 (90.91%), Postives = 180/187 (96.26%), Query Frame = 1 
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+ASMVLFE N LA+L+E++SAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+K HE+DPLQKPKQDRYALRTSPQWLGPQIEVIR +TK IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNP+
Sbjct:  256 VGSGMASMVLFETNILAVLAEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAEKQHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 442
[Close]
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 4.869e-95
Identity = 171/187 (91.44%), Postives = 179/187 (95.72%), Query Frame = 1 
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLA+ VLFEAN LA++SE+LSAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIA+IGKLMFAQFSELVNDFYNNGLPSNL+GGRNP+
Sbjct:  268 VGSGLAATVLFEANILAIMSEVLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHETDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTGGRNPS 454
[Close]
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL1_PHAVU (Phenylalanine ammonia-lyase class 1 (Fragment) OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 345.895 bits (886), Expect = 8.305e-95
Identity = 170/187 (90.91%), Postives = 181/187 (96.79%), Query Frame = 1 
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+AS+VLF+AN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY+  AKKLHEIDPLQKPKQDRYALRTSPQWLGP IEVIRF+TKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVNDFYNNGLPSNL+  RNP+
Sbjct:   54 VGSGMASIVLFDANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKDAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPS 240
[Close]
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 1.417e-94
Identity = 168/187 (89.84%), Postives = 181/187 (96.79%), Query Frame = 1 
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+AS+VLFE N LA+++E+LSA+F EVMQGKPEFTDHLTHKLKHHPGQIEAAA+MEHIL+GSSY+ +AKKLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS GRNP+
Sbjct:  252 VGSGVASIVLFETNILAVMAELLSALFCEVMQGKPEFTDHLTHKLKHHPGQIEAAAVMEHILEGSSYMKMAKKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSSGRNPS 438
[Close]
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL1_ARATH (Phenylalanine ammonia-lyase 1 OS=Arabidopsis thaliana GN=PAL1 PE=1 SV=3)

HSP 1 Score: 344.354 bits (882), Expect = 2.416e-94
Identity = 167/187 (89.30%), Postives = 181/187 (96.79%), Query Frame = 1 
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+ASMVLFE N L++L+EILSA+FAEVM GKPEFTDHLTH+LKHHPGQIEAAAIMEHILDGSSY+ +A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR+ATKSIEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL+  RNP+
Sbjct:  273 VGSGMASMVLFETNVLSVLAEILSAVFAEVMSGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSSYMKLAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRYATKSIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLTASRNPS 459
[Close]
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 3.156e-94
Identity = 170/187 (90.91%), Postives = 180/187 (96.26%), Query Frame = 1 
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLAS+VLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL GS+YV  AKKLHE+DPLQKPKQDRYALRTSPQWLGP IEVIRF+TKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKL+FAQFSELVNDFYNNGLPSNLS  RNP+
Sbjct:  273 VGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILHGSAYVKDAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPS 459
[Close]
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PALY_DIGLA (Phenylalanine ammonia-lyase OS=Digitalis lanata PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 4.122e-94
Identity = 167/187 (89.30%), Postives = 180/187 (96.26%), Query Frame = 1 
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLAS+ L+EAN L+LL+E++SA+FAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+K+HE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLAIA+IGKLMFAQFSELVNDFYNNGLPSNLSGGRNP+
Sbjct:  261 VGSGLASIALYEANILSLLAEVMSAVFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKMHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRTATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 447
[Close]
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PALY_POPTR (Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 5.383e-94
Identity = 168/187 (89.84%), Postives = 178/187 (95.19%), Query Frame = 1 
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLASMVLFE N LA+LSE+LSAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+Y+  AKKLHE DPLQKPKQDRYALRTSPQWLGPQIEVIRF+TKSIEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDN RLAIA+IGKL+FAQFSELVNDFYNNGLPSNL+  RNP+
Sbjct:  263 VGSGLASMVLFETNVLAVLSELLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYMKAAKKLHETDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNVRLAIASIGKLLFAQFSELVNDFYNNGLPSNLTASRNPS 449
[Close]
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PALY_HELAN (Phenylalanine ammonia-lyase OS=Helianthus annuus GN=PAL PE=2 SV=2)

HSP 1 Score: 343.199 bits (879), Expect = 5.383e-94
Identity = 170/187 (90.91%), Postives = 179/187 (95.72%), Query Frame = 1 
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+ASMVLFEAN LALLSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIME+ILDGS YV  A+K+HE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGK+  AQFSELVNDFYNNGLPS+LSGGRNP+
Sbjct:  259 VGSGMASMVLFEANVLALLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEYILDGSDYVKAAQKVHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKVTIAQFSELVNDFYNNGLPSHLSGGRNPS 445
The following BLAST results are available for this feature:
BLAST of CF510256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
PAL1_PEA2.186e-9591.44Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PAL1_DAUCA3.728e-9590.91Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PALY_CITLI4.869e-9591.44Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PAL1_PHAVU8.305e-9590.91Phenylalanine ammonia-lyase class 1 (Fragment) OS=... [more]
PALY_BROFI1.417e-9489.84Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
PAL1_ARATH2.416e-9489.30Phenylalanine ammonia-lyase 1 OS=Arabidopsis thali... [more]
PALY_TRISU3.156e-9490.91Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PALY_DIGLA4.122e-9489.30Phenylalanine ammonia-lyase OS=Digitalis lanata PE... [more]
PALY_POPTR5.383e-9489.84Phenylalanine ammonia-lyase OS=Populus trichocarpa... [more]
PALY_HELAN5.383e-9490.91Phenylalanine ammonia-lyase OS=Helianthus annuus G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_124000-749 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-76_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510256 ID=CF510256; Name=CF510256; organism=Citrus sinensis; type=EST; length=570bp
GTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGAGGCTAACAACCTTGC
TCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTGAAGTCATGCAAGGCA
AACCTGAGTTCACCGATCACTTGACACACAAATTGAAGCACCATCCTGGC
CAAATTGAGGCTGCTGCTATAATGGAACATATCCTCGATGGCAGCTCTTA
TGTTAACGTGGCTAAGAAGTTGCATGAGATTGATCCTCTGCAGAAGCCGA
AACAGGATCGTTATGCCCTGAGAACTTCACCACAATGGCTCGGCCCTCAG
ATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGAACGGGAGATCAACTC
GGTGAATGACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATG
GTGGCAATTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGT
TTGGCTATTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACT
TGTCAACGATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCA
GGAATCCTACCTGGATTATG
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