CF510256

Overview
NameCF510256
Unique NameCF510256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: HUTH_STAAE (Histidine ammonia-lyase OS=Staphylococcus aureus (strain Newman) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.642e-16
Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 1
Query:   34 EANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNK--ALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 543
            EA +L   SE ++A+  + + G  +   H  H +++   QI  AA M   L+GS+      ++          QD Y LR  PQ  G   +V  +  + +E E+N+ NDNPLI    N+   + GGNF G PI  ++D+ +L ++ +  +   +   LVN   N  LP+ LS
Sbjct:  210 EAEDLGYQSEWIAALTHQSLNGIIDAYRHDVHAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRV--------QDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLS 373          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: HUTH_STAAC (Histidine ammonia-lyase OS=Staphylococcus aureus (strain COL) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.642e-16
Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 1
Query:   34 EANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNK--ALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 543
            EA +L   SE ++A+  + + G  +   H  H +++   QI  AA M   L+GS+      ++          QD Y LR  PQ  G   +V  +  + +E E+N+ NDNPLI    N+   + GGNF G PI  ++D+ +L ++ +  +   +   LVN   N  LP+ LS
Sbjct:  210 EAEDLGYQSEWIAALTHQSLNGIIDAYRHDVHAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRV--------QDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLS 373          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: HUTH_STAA9 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain JH9) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.642e-16
Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 1
Query:   34 EANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNK--ALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 543
            EA +L   SE ++A+  + + G  +   H  H +++   QI  AA M   L+GS+      ++          QD Y LR  PQ  G   +V  +  + +E E+N+ NDNPLI    N+   + GGNF G PI  ++D+ +L ++ +  +   +   LVN   N  LP+ LS
Sbjct:  210 EAEDLGYQSEWIAALTHQSLNGIIDAYRHDVHSVRNFQEQINVAARMRDWLEGSTLTTRQAEIRV--------QDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLS 373          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: HUTH_STAA8 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain NCTC 8325) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.642e-16
Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 1
Query:   34 EANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNK--ALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 543
            EA +L   SE ++A+  + + G  +   H  H +++   QI  AA M   L+GS+      ++          QD Y LR  PQ  G   +V  +  + +E E+N+ NDNPLI    N+   + GGNF G PI  ++D+ +L ++ +  +   +   LVN   N  LP+ LS
Sbjct:  210 EAEDLGYQSEWIAALTHQSLNGIIDAYRHDVHAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRV--------QDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLS 373          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: HUTH_STAA3 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain USA300) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.642e-16
Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 1
Query:   34 EANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNK--ALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 543
            EA +L   SE ++A+  + + G  +   H  H +++   QI  AA M   L+GS+      ++          QD Y LR  PQ  G   +V  +  + +E E+N+ NDNPLI    N+   + GGNF G PI  ++D+ +L ++ +  +   +   LVN   N  LP+ LS
Sbjct:  210 EAEDLGYQSEWIAALTHQSLNGIIDAYRHDVHAVRNFQEQINVAARMRDWLEGSTLTTRQSEIRV--------QDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLS 373          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: HUTH_STAA2 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain JH1) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.642e-16
Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 1
Query:   34 EANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNK--ALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 543
            EA +L   SE ++A+  + + G  +   H  H +++   QI  AA M   L+GS+      ++          QD Y LR  PQ  G   +V  +  + +E E+N+ NDNPLI    N+   + GGNF G PI  ++D+ +L ++ +  +   +   LVN   N  LP+ LS
Sbjct:  210 EAEDLGYQSEWIAALTHQSLNGIIDAYRHDVHSVRNFQEQINVAARMRDWLEGSTLTTRQAEIRV--------QDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLS 373          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: HUTH_SALAR (Histidine ammonia-lyase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.642e-16
Identity = 58/178 (32.58%), Postives = 91/178 (51.12%), Query Frame = 1
Query:   28 LFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL--SGGRN 555
            LFEA  L   + +  A+  E + G     D   H  +   GQI+AA +  H+L  +S +  A+  H  + +Q P    Y+LR  PQ +G  +  +R   + +  E N+V+DNPL+     + + GGNF   P+ ++ DN  LAIA IG L   + + L+ D + + LP  L  +GG N
Sbjct:  209 LFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDAARLFRHLLTETSAI--AESHHHCNKVQDP----YSLRCQPQVMGACLTQLRQTKEVLLVEANAVSDNPLVFADAGEVISGGNFHAEPVAMAADNLALAIAEIGALSERRIA-LMMDKHMSQLPPFLVKNGGVN 379          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: HUTH_RHOSK (Histidine ammonia-lyase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.642e-16
Identity = 55/172 (31.98%), Postives = 90/172 (52.33%), Query Frame = 1
Query:   28 LFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 543
            LFE    A  + ++SA+  + + G         H L+ H GQIEAAA M  +L+GS+   + +   E D   +  QD Y +R  PQ  G  ++V+R A  ++  E N+  DNPL+ +S  + + GGNF   P+G + D   LA++ IG +   + + +V+   +  LP  L+
Sbjct:  207 LFEGWRAAQAALVISALSTDAIMGSTAPLRPEIHALRGHAGQIEAAATMRALLEGSA---IRESHREGD---QRVQDPYCIRCQPQVTGAAMDVLRMAAGTLATEANAATDNPLV-LSDGRIVSGGNFHAEPVGFAADMIALALSEIGAIAQRRVALMVDPTLSFDLPPFLT 371          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: HUTH_RHOS4 (Histidine ammonia-lyase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.642e-16
Identity = 55/172 (31.98%), Postives = 90/172 (52.33%), Query Frame = 1
Query:   28 LFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 543
            LFE    A  + ++SA+  + + G         H L+ H GQIEAAA M  +L+GS+   + +   E D   +  QD Y +R  PQ  G  ++V+R A  ++  E N+  DNPL+ +S  + + GGNF   P+G + D   LA++ IG +   + + +V+   +  LP  L+
Sbjct:  207 LFEGWRAAQAALVISALSTDAIMGSTAPLRPEIHALRGHAGQIEAAATMRALLEGSA---IRESHREGD---QRVQDPYCIRCQPQVTGAAMDVLRMAAGTLATEANAATDNPLV-LSDGRIVSGGNFHAEPVGFAADMIALALSEIGAIAQRRVALMVDPTLSFDLPPFLT 371          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: HUTH_RHOS1 (Histidine ammonia-lyase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.642e-16
Identity = 55/172 (31.98%), Postives = 90/172 (52.33%), Query Frame = 1
Query:   28 LFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 543
            LFE    A  + ++SA+  + + G         H L+ H GQIEAAA M  +L+GS+   + +   E D   +  QD Y +R  PQ  G  ++V+R A  ++  E N+  DNPL+ +S  + + GGNF   P+G + D   LA++ IG +   + + +V+   +  LP  L+
Sbjct:  207 LFEGWRAAQAALVISALSTDAIMGSTAPLRPEIHALRGHAGQIEAAATMRALLEGSA---IRESHREGD---QRVQDPYCIRCQPQVTGAAMDVLRMAAGTLATEANAATDNPLV-LSDGRIVSGGNFHAEPVGFAADMIALALSEIGAIAQRRVALMVDPTLSFDLPPFLT 371          
The following BLAST results are available for this feature:
BLAST of CF510256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
HUTH_STAAE2.642e-1630.81Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAAC2.642e-1630.81Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA92.642e-1630.81Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA82.642e-1630.81Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA32.642e-1630.81Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA22.642e-1630.81Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_SALAR2.642e-1632.58Histidine ammonia-lyase OS=Salmonella arizonae (st... [more]
HUTH_RHOSK2.642e-1631.98Histidine ammonia-lyase OS=Rhodobacter sphaeroides... [more]
HUTH_RHOS42.642e-1631.98Histidine ammonia-lyase OS=Rhodobacter sphaeroides... [more]
HUTH_RHOS12.642e-1631.98Histidine ammonia-lyase OS=Rhodobacter sphaeroides... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_124000-749 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-76_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510256 ID=CF510256; Name=CF510256; organism=Citrus sinensis; type=EST; length=570bp
GTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGAGGCTAACAACCTTGC
TCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTGAAGTCATGCAAGGCA
AACCTGAGTTCACCGATCACTTGACACACAAATTGAAGCACCATCCTGGC
CAAATTGAGGCTGCTGCTATAATGGAACATATCCTCGATGGCAGCTCTTA
TGTTAACGTGGCTAAGAAGTTGCATGAGATTGATCCTCTGCAGAAGCCGA
AACAGGATCGTTATGCCCTGAGAACTTCACCACAATGGCTCGGCCCTCAG
ATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGAACGGGAGATCAACTC
GGTGAATGACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATG
GTGGCAATTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGT
TTGGCTATTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACT
TGTCAACGATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCA
GGAATCCTACCTGGATTATG
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