CF510256

Overview
NameCF510256
Unique NameCF510256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9654 contig Csv1_Contig9654:570..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PALY_PERAE (Phenylalanine ammonia-lyase OS=Persea americana GN=PAL PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 7.031e-94
Identity = 173/188 (92.02%), Postives = 180/188 (95.74%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYA-LRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLASMVLFEAN L++LSE++SAIF EVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY+ VAKKLHE+DPLQKPKQD YA LRTSPQWLGPQIEVIR AT SIEREINSVNDNPLIDVSRNKALHG NFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNP+
Sbjct:  167 VGSGLASMVLFEANVLSVLSEVISAIFCEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKVAKKLHELDPLQKPKQDPYAALRTSPQWLGPQIEVIRNATLSIEREINSVNDNPLIDVSRNKALHGRNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 354          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL4_ARATH (Phenylalanine ammonia-lyase 4 OS=Arabidopsis thaliana GN=PAL4 PE=1 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 7.031e-94
Identity = 169/187 (90.37%), Postives = 180/187 (96.26%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLAS VLF+AN LA+LSE++SA+FAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+ LHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGV+MDN+RLAIA+IGKLMFAQFSELVNDFYNNGLPSNLSGGRNP+
Sbjct:  255 VGSGLASTVLFDANILAVLSEVMSAMFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKEAQLLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVAMDNSRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 441          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL2_POPKI (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis GN=PALG2B PE=3 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.199e-93
Identity = 170/187 (90.91%), Postives = 179/187 (95.72%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLASMVLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQI AAAIMEHILDGS+YV  A+KLHEIDPLQKPKQDR+ALRTSPQWLGP IEVIR +TK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIA+IGKLMFAQFSELVND YNNGLPSNL+GGRNP+
Sbjct:  259 VGSGLASMVLFEANVLAILSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIVAAAIMEHILDGSAYVKEAQKLHEIDPLQKPKQDRHALRTSPQWLGPLIEVIRTSTKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDLYNNGLPSNLTGGRNPS 445          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 1.566e-93
Identity = 169/187 (90.37%), Postives = 177/187 (94.65%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLAS+ LFE N L +LSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS YV  A+K+H+IDPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIA+IGKLMFAQFSELVNDFYNNGLPSNL+G RNP+
Sbjct:  266 VGSGLASLALFETNLLVVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSYYVKAAQKVHDIDPLQKPKQDRYALRTSPQWLGPQIEVIRNATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTGSRNPS 452          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL1_LITER (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.046e-93
Identity = 166/187 (88.77%), Postives = 179/187 (95.72%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+ASMVL+EAN LA+LSE++SAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS YV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGV+MDNTRLAIA+IGKL+FAQFSELVND+YNNGLPSNL+G RNP+
Sbjct:  258 VGSGMASMVLYEANILAVLSEVISAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSGYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVAMDNTRLAIASIGKLLFAQFSELVNDYYNNGLPSNLTGSRNPS 444          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PALY_WHEAT (Phenylalanine ammonia-lyase OS=Triticum aestivum GN=PAL PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 2.672e-93
Identity = 168/187 (89.84%), Postives = 178/187 (95.19%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLASMVLFEAN L+LL+E+LS +F EVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHIL+GSSY+ +AKKL E+DPL KPKQDRYALRTSPQWLGPQIEVIR ATKSIEREINSVNDNPLIDVSR KA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNP+
Sbjct:  248 VGSGLASMVLFEANVLSLLAEVLSGVFCEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMMLAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREINSVNDNPLIDVSRGKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 434          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 340.117 bits (871), Expect = 4.557e-93
Identity = 167/187 (89.30%), Postives = 176/187 (94.12%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLASMVLF+AN LA+ SE+LSAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN RLA+A+IGKLMF QFSELVND+YNNGLPSNL+ GRNP+
Sbjct:  260 VGSGLASMVLFDANVLAVFSEVLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHETDPLQKPKQDRYALRTSPQWLGPQIEVIRSATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNARLALASIGKLMFGQFSELVNDYYNNGLPSNLTAGRNPS 446          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL5_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL5 PE=3 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 5.952e-93
Identity = 166/187 (88.77%), Postives = 179/187 (95.72%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+ASMVLFE+N LA++SE+LSAIFAEVM GKPEFTD+LTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVND+YNNGLP NL+ GRNP+
Sbjct:  269 VGSGMASMVLFESNILAVMSEVLSAIFAEVMNGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPLNLTAGRNPS 455          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 5.952e-93
Identity = 167/187 (89.30%), Postives = 176/187 (94.12%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLASMVLF+AN LA+ SE+LSAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV   +KLHE DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN RLA+A+IGKLMFAQFSELVND+YNNGLPSNL+ GRNP+
Sbjct:  260 VGSGLASMVLFDANILAVFSEVLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAPQKLHETDPLQKPKQDRYALRTSPQWLGPQIEVIRSATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNARLALASIGKLMFAQFSELVNDYYNNGLPSNLTAGRNPS 446          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL1_POPKI (Phenylalanine ammonia-lyase G1 OS=Populus kitakamiensis GN=PALG1 PE=3 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 5.952e-93
Identity = 170/187 (90.91%), Postives = 179/187 (95.72%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLASMVLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV  A+KL EIDPLQKPKQDRYALRTSPQWLGP IEVIR +TK IEREINSVNDNPLIDVSR+KAL GGNFQGTPIGVSMDNTRLAIA+IGKLMFAQFSELVNDFYNNGLPSNL+GGRNP+
Sbjct:  230 VGSGLASMVLFEANVLAILSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKEAQKLLEIDPLQKPKQDRYALRTSPQWLGPLIEVIRTSTKMIEREINSVNDNPLIDVSRSKALQGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTGGRNPS 416          
The following BLAST results are available for this feature:
BLAST of CF510256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
PALY_PERAE7.031e-9492.02Phenylalanine ammonia-lyase OS=Persea americana GN... [more]
PAL4_ARATH7.031e-9490.37Phenylalanine ammonia-lyase 4 OS=Arabidopsis thali... [more]
PAL2_POPKI1.199e-9390.91Phenylalanine ammonia-lyase G2B OS=Populus kitakam... [more]
PAL2_CICAR1.566e-9390.37Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL1_LITER2.046e-9388.77Phenylalanine ammonia-lyase 1 OS=Lithospermum eryt... [more]
PALY_WHEAT2.672e-9389.84Phenylalanine ammonia-lyase OS=Triticum aestivum G... [more]
PAL2_TOBAC4.557e-9389.30Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL5_SOLLC5.952e-9388.77Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL3_TOBAC5.952e-9389.30Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL1_POPKI5.952e-9390.91Phenylalanine ammonia-lyase G1 OS=Populus kitakami... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_124000-749 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-76_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510256 ID=CF510256; Name=CF510256; organism=Citrus sinensis; type=EST; length=570bp
GTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGAGGCTAACAACCTTGC
TCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTGAAGTCATGCAAGGCA
AACCTGAGTTCACCGATCACTTGACACACAAATTGAAGCACCATCCTGGC
CAAATTGAGGCTGCTGCTATAATGGAACATATCCTCGATGGCAGCTCTTA
TGTTAACGTGGCTAAGAAGTTGCATGAGATTGATCCTCTGCAGAAGCCGA
AACAGGATCGTTATGCCCTGAGAACTTCACCACAATGGCTCGGCCCTCAG
ATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGAACGGGAGATCAACTC
GGTGAATGACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATG
GTGGCAATTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGT
TTGGCTATTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACT
TGTCAACGATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCA
GGAATCCTACCTGGATTATG
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