CF510256

Overview
NameCF510256
Unique NameCF510256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9654 contig Csv1_Contig9654:570..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=ZB8 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 7.774e-93
Identity = 168/187 (89.84%), Postives = 177/187 (94.65%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLAS VLFEAN LA+L+E+LSA+F EVM GKPE+TDHLTHKLKHHPGQIEAAAIMEHIL+GSSY+  AKKL E+DPL KPKQDRYALRTSPQWLGPQIEVIR ATKSIEREINSVNDNPLIDVSR KALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNP+
Sbjct:  261 VGSGLASTVLFEANILAILAEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKHAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 447          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSI (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. indica GN=ZB8 PE=3 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 7.774e-93
Identity = 168/187 (89.84%), Postives = 177/187 (94.65%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLAS VLFEAN LA+L+E+LSA+F EVM GKPE+TDHLTHKLKHHPGQIEAAAIMEHIL+GSSY+  AKKL E+DPL KPKQDRYALRTSPQWLGPQIEVIR ATKSIEREINSVNDNPLIDVSR KALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNP+
Sbjct:  261 VGSGLASTVLFEANILAILAEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKHAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 447          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL2_ARATH (Phenylalanine ammonia-lyase 2 OS=Arabidopsis thaliana GN=PAL2 PE=1 SV=2)

HSP 1 Score: 338.961 bits (868), Expect = 1.015e-92
Identity = 166/187 (88.77%), Postives = 179/187 (95.72%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+ASMVLFEAN  A+L+E+LSAIFAEVM GKPEFTDHLTH+LKHHPGQIEAAAIMEHILDGSSY+ +A+K+HE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATKSIEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL+   NP+
Sbjct:  265 VGSGMASMVLFEANVQAVLAEVLSAIFAEVMSGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSSYMKLAQKVHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRQATKSIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLTASSNPS 451          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL1_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=TPA1 PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.015e-92
Identity = 165/187 (88.24%), Postives = 178/187 (95.19%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+ASMVLF++N LA++SE+LSAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN RLA+A+IGKLMFAQFSELVND+YNNGLPSNL+  RNP+
Sbjct:  263 VGSGMASMVLFDSNILAVMSEVLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNARLALASIGKLMFAQFSELVNDYYNNGLPSNLTASRNPS 449          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL4_POPKI (Phenylalanine ammonia-lyase G4 (Fragment) OS=Populus kitakamiensis GN=PALG4 PE=3 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 5.039e-92
Identity = 168/188 (89.36%), Postives = 178/188 (94.68%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTR-LAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSGLASMVLFE N LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAA+MEHILDGSSYV  A+KLHEIDPLQKPKQDRYALRTSPQWLGP IEVIR +TK IEREINSVNDNPLIDVSRNKALHGGNF G+PIGVSMDNT  LAIA+IGKLMFAQFSELVND+YNNGLPSNL+GGRNP+
Sbjct:  118 VGSGLASMVLFETNVLAILSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAVMEHILDGSSYVKAAQKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRTSTKMIEREINSVNDNPLIDVSRNKALHGGNFPGSPIGVSMDNTLVLAIASIGKLMFAQFSELVNDYYNNGLPSNLTGGRNPS 305          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL1_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 5.039e-92
Identity = 164/187 (87.70%), Postives = 178/187 (95.19%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGS +AS+VLFE+N  A++SE+LSAIF EVM GKPEFTD+LTHKLKHHPGQIEAAAIMEHILDGSSYV VA+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVND+YNNGLPSNL+ GRNP+
Sbjct:  252 VGSAMASIVLFESNIFAVMSEVLSAIFTEVMNGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYVKVAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTAGRNPS 438          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL2_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 6.581e-92
Identity = 165/187 (88.24%), Postives = 178/187 (95.19%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+ASMVLFEAN LA+LSE+LSAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILD S Y+  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLA+A+IGKL+FAQFSELVND+YNNGLPSNL+ GRNP+
Sbjct:  256 VGSGMASMVLFEANVLAVLSEVLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDRSYYMKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRQATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLALASIGKLIFAQFSELVNDYYNNGLPSNLTAGRNPS 442          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL2_LITER (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 8.595e-92
Identity = 163/187 (87.17%), Postives = 177/187 (94.65%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+ASMVL+EAN L ++SE+LSA+FAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS YV  A+ LHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGV+MDNTRLAIAAIGKL+FAQFSELVND+YNNGLPSNL+G R+P+
Sbjct:  253 VGSGMASMVLYEANILGVMSEVLSAVFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSGYVKAAELLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVAMDNTRLAIAAIGKLLFAQFSELVNDYYNNGLPSNLTGSRDPS 439          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL2_SOLTU (Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanum tuberosum GN=PAL-2 PE=3 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 1.466e-91
Identity = 163/187 (87.17%), Postives = 178/187 (95.19%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGS +AS+VLFE+N LA++ E+LSAIFAEVM GKPEFTD+LTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVND+YNNGLPSNL+ GRNP+
Sbjct:  271 VGSAMASIVLFESNILAVMFEVLSAIFAEVMNGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTAGRNPS 457          
BLAST of CF510256 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 1.466e-91
Identity = 162/187 (86.63%), Postives = 179/187 (95.72%), Query Frame = 1
Query:    1 VGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPT 561
            VGSG+AS+VL+++N LA++ E+LSAIFAEVM GKPEFTD+LTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVND+YNNGLPSNL+ GRNP+
Sbjct:  268 VGSGMASIVLYDSNILAVMFEVLSAIFAEVMNGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTAGRNPS 454          
The following BLAST results are available for this feature:
BLAST of CF510256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
PAL2_ORYSJ7.774e-9389.84Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL2_ORYSI7.774e-9389.84Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL2_ARATH1.015e-9288.77Phenylalanine ammonia-lyase 2 OS=Arabidopsis thali... [more]
PAL1_TOBAC1.015e-9288.24Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL4_POPKI5.039e-9289.36Phenylalanine ammonia-lyase G4 (Fragment) OS=Popul... [more]
PAL1_SOLLC5.039e-9287.70Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL2_IPOBA6.581e-9288.24Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=... [more]
PAL2_LITER8.595e-9287.17Phenylalanine ammonia-lyase 2 OS=Lithospermum eryt... [more]
PAL2_SOLTU1.466e-9187.17Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanu... [more]
PAL1_SOLTU1.466e-9186.63Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_124000-749 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-76_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510256 ID=CF510256; Name=CF510256; organism=Citrus sinensis; type=EST; length=570bp
GTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGAGGCTAACAACCTTGC
TCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTGAAGTCATGCAAGGCA
AACCTGAGTTCACCGATCACTTGACACACAAATTGAAGCACCATCCTGGC
CAAATTGAGGCTGCTGCTATAATGGAACATATCCTCGATGGCAGCTCTTA
TGTTAACGTGGCTAAGAAGTTGCATGAGATTGATCCTCTGCAGAAGCCGA
AACAGGATCGTTATGCCCTGAGAACTTCACCACAATGGCTCGGCCCTCAG
ATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGAACGGGAGATCAACTC
GGTGAATGACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATG
GTGGCAATTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGT
TTGGCTATTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACT
TGTCAACGATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCA
GGAATCCTACCTGGATTATG
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