CF831923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831923 vs. ExPASy Swiss-Prot
Match: SERA_SYNY3 (D-3-phosphoglycerate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=serA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.040e-27 Identity = 61/168 (36.31%), Postives = 99/168 (58.93%), Query Frame = 2 Query: 227 VLIAEKLGQAGLDLLQEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 730 VL+++ + Q G+D+L++ A VD LS E+ + DA+++RS TKV + ++ + +LK++GRAGVG+DN+D+ AAT G + R++ A+ SVK KW+R +++G + KTL V+G GK+GS VA AK +GM ++A+DP Sbjct: 32 VLVSDSIDQVGIDILKQVAQVDVKTGLSEAEIIDIVPEYDAIMLRSATKVTEKIIQAGS-QLKIIGRAGVGVDNIDVPAATRQGIVVVNSPEGNTIAAAEHALAMMMALARHIPDANKSVKESKWERKQFIGTEVYKKTLGVVGLGKIGSHVAGVAKAMGMKLLAYDP 198
BLAST of CF831923 vs. ExPASy Swiss-Prot
Match: SERA_RAT (D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3) HSP 1 Score: 121.709 bits (304), Expect = 4.040e-27 Identity = 71/169 (42.01%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 227 VLIAEKLGQAGLDLLQEFA-NVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 730 +LI++ L +LQ+ V NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW R K++G L GKTL +LG G++G EVA R + GM + +DP Sbjct: 9 ILISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMLMCLARQIPQATASMKDGKWDRKKFMGTELNGKTLGILGLGRIGREVAARMQAFGMKTVGYDP 176
BLAST of CF831923 vs. ExPASy Swiss-Prot
Match: SERA_BOVIN (D-3-phosphoglycerate dehydrogenase OS=Bos taurus GN=PHGDH PE=2 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 9.000e-27 Identity = 71/169 (42.01%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 227 VLIAEKLGQAGLDLLQEFA-NVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 730 VLI++ L +LQ+ V NLS EEL ++ C+ LIVRS TKV D+ ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GK L +LG G++G EVA R + GM I +DP Sbjct: 9 VLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTSDII-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQAAASMKDGKWERKKFMGTELNGKVLGILGLGRIGREVATRMQSFGMKTIGYDP 176
BLAST of CF831923 vs. ExPASy Swiss-Prot
Match: SERA_MYCLE (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae GN=serA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.460e-24 Identity = 65/170 (38.24%), Postives = 93/170 (54.71%), Query Frame = 2 Query: 221 PTVLIAEKLGQAGLDLLQEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 730 P VLIA+KL Q+ + L + V +L + DAL+VRS T V+ +V ++A +LK+V RAGVG+DNVD+ AAT G L R +A+ADAS++A W+R+ + G + GKT+ V+G G++G VA R G HVIA+DP Sbjct: 4 PVVLIADKLAQSTVAALGDQVEVRWVDGPDRTKLLAAVPEADALLVRSATTVDAEVL-AAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIAEADASLRAHIWKRSSFSGTEIFGKTVGVVGLGRIGQLVAARIAAFGAHVIAYDP 172
BLAST of CF831923 vs. ExPASy Swiss-Prot
Match: SERA_BACSU (D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis GN=serA PE=3 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 5.460e-24 Identity = 64/169 (37.87%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 227 VLIAEKLGQAGLDLLQEFANVDCAY-NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 730 VL+++K+ GL L E ++ N++ E ++ DAL+VRS TKV D+F LK+VGRAGVG+DN+D+ AT+ G + R++ QA+ SVK+ +W R YVG L GKTL ++G G++GSE+A+RA+ GM V DP Sbjct: 4 VLVSDKMSNDGLQPLIESDFIEIVQKNVADAE--DELHTFDALLVRSATKVTEDLFNKMTS-LKIVGRAGVGVDNIDIDEATKHGVIVINAPNGNTISTAEHTFAMISSLMRHIPQANISVKSREWNRTAYVGSELYGKTLGIVGLGRIGSEIAQRARAFGMTVHVFDP 169
BLAST of CF831923 vs. ExPASy Swiss-Prot
Match: SERA_MYCTU (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis GN=serA PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.717e-22 Identity = 60/170 (35.29%), Postives = 91/170 (53.53%), Query Frame = 2 Query: 221 PTVLIAEKLGQAGLDLLQEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 730 P VLIA+KL + + L + V ++L + DAL+VRS T V+ +V ++A +LK+V RAGVG+DNVD+ AAT G L R + ADAS++ W+R+ + G + GKT+ V+G G++G VA+R G +V+A+DP Sbjct: 4 PVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVL-AAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDP 172
BLAST of CF831923 vs. ExPASy Swiss-Prot
Match: SERA_MYCBO (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis GN=serA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.717e-22 Identity = 60/170 (35.29%), Postives = 91/170 (53.53%), Query Frame = 2 Query: 221 PTVLIAEKLGQAGLDLLQEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP 730 P VLIA+KL + + L + V ++L + DAL+VRS T V+ +V ++A +LK+V RAGVG+DNVD+ AAT G L R + ADAS++ W+R+ + G + GKT+ V+G G++G VA+R G +V+A+DP Sbjct: 4 PVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVL-AAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDP 172
BLAST of CF831923 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19 Identity = 53/177 (29.94%), Postives = 92/177 (51.98%), Query Frame = 2 Query: 218 KPTVLIAEKLGQAGLDLLQEFANVDC---AYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRN-------KYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVI 718 KP VLI K+ + G+ +L+E V+ + +S E L K+ DAL+ +++ +VF++ A RLK+V VG DN+D+ AT+ G R + +AD V++G+W++ ++G + G+T+ ++GFG++G +ARRAKG GM ++ Sbjct: 2 KPKVLITRKIPENGIKMLREHFEVEVWEDEHEISREVLLEKVRDVDALVTMLSERIDAEVFDA-APRLKIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRIL 177
BLAST of CF831923 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17 Identity = 52/177 (29.38%), Postives = 89/177 (50.28%), Query Frame = 2 Query: 218 KPTVLIAEKLGQAGLDLLQEFANVDC---AYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNK-------YVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVI 718 KP V I + + G+++L+E V+ + E+L K+ DAL+ +++++VFE+ A RL++V VG DN+D+ AT G R+V + D V++G+W+R ++G L GKT+ ++GFG++G +ARRAKG M ++ Sbjct: 2 KPKVFITRAIPENGINMLEEEFEVEVWEEEREIPREKLLEKVKDVDALVTMLSERIDQEVFEN-APRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKGFNMRIL 177
BLAST of CF831923 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 53/177 (29.94%), Postives = 88/177 (49.72%), Query Frame = 2 Query: 218 KPTVLIAEKLGQAGLDLLQEFANVDC---AYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRN-------KYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVI 718 KP V I + + G+D+L+E V+ + E L K+ DAL+ +++ +VF++ A RL++V VG DNVD+ AT G R + +AD+ ++G+W+R ++G + GKT+ ++GFG++G VARRAKG GM ++ Sbjct: 2 KPKVFITRAIPENGIDMLREHFEVEVWPEEREIPREVLLEKVRDVDALVTMLSERIDGEVFDN-APRLRIVANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGKTIGIIGFGRIGQAVARRAKGFGMRIL 177 The following BLAST results are available for this feature:
BLAST of CF831923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831923 ID=CF831923; Name=CF831923; organism=Citrus sinensis; type=EST; length=730bpback to top |