CF831926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROMA (ATP synthase gamma chain OS=Prochlorococcus marinus GN=atpG PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.579e-21 Identity = 49/110 (44.55%), Postives = 78/110 (70.91%), Query Frame = -1 Query: 243 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGA 569 DE+FR+T + ++ +D N+ + P ++FEQ P Q+L++++PLY+ +Q+LRA QE+ ASE+A+RM+ M+ +DNA EL K L++ YN+ RQ IT E+LE+V GA Sbjct: 205 DEIFRITTKGSRFVIEKDPAPANEEPVLPSDVVFEQSPDQLLNSLLPLYLQNQLLRALQEAAASELASRMTAMNNASDNAKELAKTLNLTYNKARQAAITQEILEVVGGA 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_GLOVI (ATP synthase gamma chain OS=Gloeobacter violaceus GN=atpG PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.694e-21 Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = -1 Query: 237 DELFRLTPNEGKMIVARDSVTFN-KGELSPLMLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEA 569 DE F+L G V R+ + E + +FEQDP Q+LDA++PLY+ S++L A QES ASE+AARM+ MS +DNA +L L++ YN+ RQ IT E+LE+V+GA A Sbjct: 203 DETFKLITKGGGFEVLREKQQVRTEPEFAADTIFEQDPTQLLDALLPLYLTSEVLHALQESSASELAARMTAMSAASDNAKKLLSTLTIVYNKARQASITQEILEVVSGANA 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS9 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9902) GN=atpG PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.002e-21 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = -1 Query: 237 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEA 569 DE+F LT ++G++ V + + N P ++FEQ P Q+L+A++PLY+ +Q+LR QES ASE+A+RM+ M+ +DNA EL K L++ YN+ RQ IT E+LE+V G+ A Sbjct: 203 DEIFNLTTDQGRLTVEPGTSSANTAPKIPSDIVFEQSPDQLLNALLPLYLQNQLLRCLQESAASELASRMTAMNNASDNAKELAKTLTLDYNKARQAAITQEILEVVGGSAA 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_SYNPX (ATP synthase gamma chain OS=Synechococcus sp. (strain WH8102) GN=atpG PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.002e-21 Identity = 52/113 (46.02%), Postives = 78/113 (69.03%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE+FRLT +G++ V + N P ++FEQ P Q+L+A++PLY+ +Q+LR+ QES ASE+A+RM+ M+ +DNA EL K L++ YN+ RQ IT E+LE+ GA A+ Sbjct: 203 DEIFRLTTKDGRLTVEPGAGPANTEPKIPSDIVFEQTPEQLLNALLPLYLQNQLLRSLQESAASELASRMTAMNNASDNAKELAKTLTLDYNKARQAAITQEILEVAGGAAAV 315
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_SYNSC (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9605) GN=atpG PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.746e-20 Identity = 52/113 (46.02%), Postives = 77/113 (68.14%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE+FRLT +G + V + N P ++FEQ P Q+L+A++PLY+ +Q+LR+ QES ASE+A+RM+ M+ +DNA EL K L++ YN+ RQ IT E+LE+ GA A+ Sbjct: 203 DEIFRLTTKDGLLTVEPGAGPANTEPKIPSDIVFEQTPEQLLNALLPLYLQNQLLRSLQESAASELASRMTAMNNASDNAKELAKTLTLDYNKARQAAITQEILEVAGGAAAV 315
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROMM (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9313) GN=atpG PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.636e-20 Identity = 50/110 (45.45%), Postives = 76/110 (69.09%), Query Frame = -1 Query: 243 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGA 569 DE+FRLT + ++ V + N+ P ++FEQ P Q+L+A++PLY+ +Q+LRA QES ASE+A+RM+ M+ +DNA L K L++ YN+ RQ IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSRLTVEKGVGPANEQPPLPSDIIFEQSPEQLLNALLPLYLQNQMLRALQESAASELASRMTAMNNASDNAKALAKTLTLDYNKARQAAITQEILEVVGGS 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROM3 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9303) GN=atpG PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.636e-20 Identity = 50/110 (45.45%), Postives = 76/110 (69.09%), Query Frame = -1 Query: 243 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGA 569 DE+FRLT + ++ V + N+ P ++FEQ P Q+L+A++PLY+ +Q+LRA QES ASE+A+RM+ M+ +DNA L K L++ YN+ RQ IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSRLTVEKGVGPANEQPPLPSDIIFEQSPEQLLNALLPLYLQNQMLRALQESAASELASRMTAMNNASDNAKALAKTLTLDYNKARQAAITQEILEVVGGS 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_VIGUN (ATP synthase subunit gamma, chloroplastic (Fragment) OS=Vigna unguiculata PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.478e-19 Identity = 48/73 (65.75%), Postives = 56/73 (76.71%), Query Frame = -1 Query: 351 DELFRLTPNEGKMIVARDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMS 569 DE FRLT EGK+ V RD V + SP++ FEQDP QILDA++PLY+NSQILRA QES ASE+AARMS MS Sbjct: 42 DEFFRLTTKEGKLTVERDVVRTKTTDYSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMS 114
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PELPB (ATP synthase gamma chain OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=atpG PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.408e-16 Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = -1 Query: 231 LTPNEGKMIVARDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEALT 554 L PN + ++ + E S ++E P+ I+D ++P ++N+QI R ES A+E AARMS M T+NA EL + L+++YN+ RQ IT EL EIV+GA+ALT Sbjct: 183 LAPNLREEVILPIAPEIPGTESSSDYIYEPSPSAIIDELVPKHLNTQIWRMMLESSAAEQAARMSAMDSATENAKELMRTLNISYNRARQAAITTELSEIVSGADALT 290
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROA2 (ATP synthase gamma chain OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=atpG PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.209e-15 Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = -1 Query: 234 LFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 476 ++E PA I+D ++P ++N+Q+ R ES A+E AARM+ M T+NA EL + L+++YN+ RQ IT EL EIVAGAEAL Sbjct: 209 IYEPSPASIIDVLVPKHLNTQVWRMMLESNAAEQAARMAAMDSATENAKELLRLLNISYNRARQAAITTELSEIVAGAEAL 289 The following BLAST results are available for this feature:
BLAST of CF831926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 412
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831926 ID=CF831926; Name=CF831926; organism=Citrus sinensis; type=EST; length=569bpback to top |