CF831929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.560e-12 Identity = 44/129 (34.11%), Postives = 71/129 (55.04%), Query Frame = -3 Query: 267 HFDMAEPAFLQIAQ-------YRAGIVPISFRRVPCAKKG-GIRFTVN--GHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSL----SFQLTASDGRTVTSNNVVPGNW 611 HFDM+ + +A+ AGI+ + +RRVPC G I F V+ + ++ VLI G GD+++V + + GW M +NWG W+ NS G++L S +LT+ G+ + +NNV+P +W Sbjct: 152 HFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASW 279
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.353e-11 Identity = 42/135 (31.11%), Postives = 68/135 (50.37%), Query Frame = -3 Query: 267 HFDMAEPAFLQIAQ-------YRAGIVPISFRRVPCAKKG---GIRFTVNGHSYFNLVLITNVGGAGDVHSVSI-----KGSKTGWQAMSRNWGQNWQSNSYLNGQS-----LSFQLTASDGRTVTSNNVVPGNW 611 HFD++ AF +A+ AG +P+ + RVPC +G R + Y+ VL+ + G GD+ +V + G W AM ++WG W+ NS G + +S +LT+ GRT+ ++NV+P W Sbjct: 126 HFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNS---GPAPLQAPMSIRLTSGSGRTLVASNVIPAGW 257
BLAST of CF831929 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11 Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = -3 Query: 267 HFDMAEPAFLQIA------QYRA-GIVPISFRRVPCAKKGGIRFT----VNGHSYFNLVLITNVGGAGDVHSVSIK--GSKTGWQAMSRNWGQNWQSNSYLNGQS-LSFQLTASDGRTVTSNNVVPGNW 611 HFD++ AF +A Q RA G++ I + RVPC GG++ T V + + VL+ G GD+ V + G+ W M ++WG W+ N+ Q+ S +LT+S G+T+ ++NV+P W Sbjct: 125 HFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGW 252 The following BLAST results are available for this feature:
BLAST of CF831929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831929 ID=CF831929; Name=CF831929; organism=Citrus sinensis; type=EST; length=625bpback to top |