CF831931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.391e-45 Identity = 79/145 (54.48%), Postives = 105/145 (72.41%), Query Frame = -2 Query: 268 GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 702 G+I +TATNFCPP+ S G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F G+ YF ++L NVGGAGD+ + +KG KTGW M +NWGQNW + L GQ +SF++T SDG T NNV+P NW Sbjct: 122 GTIKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 264
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.372e-45 Identity = 78/145 (53.79%), Postives = 112/145 (77.24%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTA-SDGRTVTSNNVVPGNW 699 S +VTATN CPPN ++ GGWCNPP HFDMA+PAF+++A +RAGI+P+++RR+PC + GG+RF G+SY+ L+ + NVGGAGD+ S+++KGS+T W +MS NWG ++Q+ S L GQSLSF++T+ + G T+ + NV P NW Sbjct: 105 STVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANW 249
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 6.903e-45 Identity = 82/144 (56.94%), Postives = 106/144 (73.61%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699 ++ VTATN CPPN AL +D GGWCNPP HFDM++PA+ QI Y+AGIVP+ ++R+ C ++GG+RFTV G +YF LVLITNV G+G V S IKG+ TGW MSRNWG NWQS + L GQ+LSF +T + G+ + +V P W Sbjct: 99 AVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWW 242
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 6.903e-45 Identity = 80/145 (55.17%), Postives = 107/145 (73.79%), Query Frame = -2 Query: 268 GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 702 GS+ +TATNFCP N + + D WCNPP +HFD++ FL+IA+Y+AG+VP+ +RRIPC+K GG++F G+ YF +VLI NVGGAGD+ V +KG+KTGW M +NWGQNW + + L GQ LSF++T SDG T NV+P NW Sbjct: 119 GSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNW 261
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 6.903e-45 Identity = 83/144 (57.64%), Postives = 106/144 (73.61%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699 SI+VTATNFC PN L D GG CNPP HF + +F +IA ++AG++PI +RR+ C + GG+RF V G S+F VLI+NVGGAGDV SV IKG+++GW +M RNWGQ W NS GQ LSF+LT+SDG+T+T+ NVVP W Sbjct: 101 SIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEW 244
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.538e-44 Identity = 79/144 (54.86%), Postives = 108/144 (75.00%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699 +++VTAT+FC PNL LS+D GGWCN P +HF+M+E AFL++A+ +A IVP+ FRR+ C + GG+RFT+ G + F VLITNV G+V +V +KGS+TGW M RNWGQNWQ ++ L GQ LSF++T GRTV + +V P +W Sbjct: 104 TVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDW 247
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 4.474e-44 Identity = 78/145 (53.79%), Postives = 107/145 (73.79%), Query Frame = -2 Query: 268 GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 702 GS+ +TATNFCP N + + D WCNPP +HFD++ FL+IA+Y+AG+VP+ +RRIPC+K GG++F G+ YF +VLI NVGGAGD+ V +K +KTGW M +NWGQNW +++ L GQ LSF++T +DG T NV+P NW Sbjct: 125 GSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNW 267
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 9.968e-44 Identity = 78/145 (53.79%), Postives = 106/145 (73.10%), Query Frame = -2 Query: 268 GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 702 GSI +TATNFCPP+ NDN WCNPP +HFD+++P FL+IA+Y+AG+VP+ FRR+PCAK GG++F + G+ +F ++L NVGGAG V ++ IKG++T W AM +NWGQ W + L GQ LSF+LT SDG +V P +W Sbjct: 157 GSIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDW 299
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.947e-43 Identity = 76/143 (53.15%), Postives = 107/143 (74.83%), Query Frame = -2 Query: 268 IVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGR-TVTSNNVVPGNW 693 +VTATN CPPN +++NGGWCNPP HFD+ +PAF++IA ++AGI+P+S+RR+ C K GGIRF G+ Y+ LV + NVGG GD+ ++++KGS+TGW MS NWG ++Q+ S L GQSLSF+LT+ R T+ + N P +W Sbjct: 102 VVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASW 244
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43 Identity = 82/144 (56.94%), Postives = 103/144 (71.53%), Query Frame = -2 Query: 268 SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 699 SII+TATNFC PN D GG CNPP +HF + AF +IA ++AG +P+ +RRI C K+G +RFTV+G F VLITNV G+GD+ +V IKGS+TGW M RNWGQNW N+ L Q+LSF++T+SD TVTS NV P NW Sbjct: 109 SIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNW 252 The following BLAST results are available for this feature:
BLAST of CF831931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831931 ID=CF831931; Name=CF831931; organism=Citrus sinensis; type=EST; length=703bpback to top |