CF831931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13 Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = -2 Query: 268 VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVN--GHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSL----SFQLTASDGRTVTSNNVVPGNW 690 V T+ CP GG C HFDM+ + +A+ AGI+ + +RR+PC G I F V+ + ++ VLI G GD+++V + + GW M +NWG W+ NS G++L S +LT+ G+ + +NNV+P +W Sbjct: 135 VVITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASW 279
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 48/163 (29.45%), Postives = 77/163 (47.24%), Query Frame = -2 Query: 268 IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG---GIRFTVNGHSYFNLVLITNVGGAGDVHSVSI-----KGSKTGWQAMSRNWGQNWQSNSYLNGQS-----LSFQLTASDGRTVTSNNVVPGNW 696 + V T+ CP GG C HFD++ AF +A+ AG +P+ + R+PC +G R + Y+ VL+ + G GD+ +V + G W AM ++WG W+ NS G + +S +LT+ GRT+ ++NV+P W Sbjct: 107 VTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNS---GPAPLQAPMSIRLTSGSGRTLVASNVIPAGW 257
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 49/157 (31.21%), Postives = 78/157 (49.68%), Query Frame = -2 Query: 268 IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA------QYRA-GIVPISFRRIPCAKKGGIRFT----VNGHSYFNLVLITNVGGAGDVHSVSIK--GSKTGWQAMSRNWGQNWQSNSYLNGQS-LSFQLTASDGRTVTSNNVVPGNW 696 + V T+ CP GG C HFD++ AF +A Q RA G++ I + R+PC GG++ T V + + VL+ G GD+ V + G+ W M ++WG W+ N+ Q+ S +LT+S G+T+ ++NV+P W Sbjct: 106 VTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGW 252
BLAST of CF831931 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 50/158 (31.65%), Postives = 79/158 (50.00%), Query Frame = -2 Query: 268 IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA------QYRA-GIVPISFRRIPCAKKGGIRFTV-----NGHSYFNLVLITNVGGAGDVHSVSIK--GSKTGWQAMSRNWGQNWQSNSYLNGQS-LSFQLTASDGRTVTSNNVVPGNW 696 + V T+ CP GG C HFD++ AF +A Q RA G++ I + R+PC GG+ T + SYF VL+ G GD+ + + G+ W M ++WG W+ ++ Q+ LS +LT+S G+T+ ++NV+P W Sbjct: 106 VTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTSSSGKTLVASNVIPSGW 252 The following BLAST results are available for this feature:
BLAST of CF831931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF831931 ID=CF831931; Name=CF831931; organism=Citrus sinensis; type=EST; length=703bpback to top |