CF831954

Overview
NameCF831954
Unique NameCF831954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9328 contig Csv1_Contig9328:204..1035. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.957e-11
Identity = 69/264 (26.14%), Postives = 124/264 (46.97%), Query Frame = 3
Query:   60 IITCLVSVLAVAYFAWNVNKSRKANAKLPPGPRG-LPAVGYLPFLGTTDLHKKFTELCGVYGP--IFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDP-PIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYN-NDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPVLSWFD--IQGIERKAKKISLWFENIINSTVEKY 830
            ++  L   LA A  + +    +    +LPP P G LP +G+L  +G+   H  F +L   YG   +  + +G    +VVS+P   + V+R  D   A R   P+A ++  +   D+A++ YG  W   RK     ++S   + +    R++EV+  +  + +  +   G  +D+ EL        +   + GE+   R++G   L  EL    A    L+G  N+ D FP L+  D  ++ I  KAK +S  ++++ N  + +Y
Sbjct:   28 VLLLLAIRLAAAARSSSATSPKWKQHRLPPTPPGKLPIIGHLHLIGSHP-HVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIR-YNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVVARIRDAAEASPGTALDMTELLGGYASDFVCRAVLGES--HRKQGRNKLFRELTETSA---ALLGGFNVEDYFPKLADVDLFLRIICAKAKSVSKRWDSLFNELLSEY 284          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.957e-11
Identity = 58/242 (23.97%), Postives = 106/242 (43.80%), Query Frame = 3
Query:  117 KSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPV--LSWF--DIQGIERKAKKISLWFENIINSTVEKY 830
            K +++   LPPGP  LP VG L  L    +H+   EL   +GP+  L LG    V++SS    ++ ++  D     R    A  V +    +I    Y  EW +LRK  V +  S   + +   +R++E    ++ L +   K   P+D+ +         +   ++G++    +        EL F+  + +    T   SD+FP+  L WF   + G  +   K+ +  +N +N  ++ +
Sbjct:   24 KMKESKRNLPPGPAKLPIVGNLHQLQGM-VHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALK-QSPVDLSKTLFCLAASTVFRPVFGQSFSDNKHFSEEKIEELVFEAQKSL----TFKFSDLFPIPGLGWFIGFVSGQHKGLHKVFIEVDNFLNHMIDDH 259          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: CP254_MOUSE (Cytochrome P450 2C54 OS=Mus musculus GN=Cyp2c54 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11
Identity = 66/227 (29.07%), Postives = 101/227 (44.49%), Query Frame = 3
Query:   72 LVSVLAVA-YFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKI-GKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTP--NISDVFPVL 740
            LV VL ++  F  ++ +      KLPPGP  LP +G +  +   D+ + FT L  VYGP++ L+LG K  VV+     VK+ + D    FA R        AT  G  I +SN G  W   R F    +M+  +L       +  V+   R L     K  G P D   +       VI +I++ +  + ++    N    L  KL E+  ++ TP   + + FP L
Sbjct:    5 LVLVLTLSCLFLLSLWRQSYERGKLPPGPTPLPIIGNILQIDVKDICQSFTNLSRVYGPVYTLYLGRKPTVVLHGYEAVKEALVDHGDVFAGRGRLPVFDKAT-NGMGIGFSN-GSVWKNTRHF---SLMTLRNLGMGKRSIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQDRFDYKDRDFLN----LLEKLDEISKILSTPWLQVCNTFPAL 222          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: CP2H1_CHICK (Cytochrome P450 2H1 OS=Gallus gallus GN=CYP2H1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 58/204 (28.43%), Postives = 94/204 (46.08%), Query Frame = 3
Query:   54 TAIITCLVSVLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRD--PPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNL 659
            T ++   +S L +A  AW   +S     K PPGP  +P +G +  L   DL   F EL   YGPIF + LG K  VV+    +VK+ + D    F+ R   P I  L   F G  I  SN G  W +LR+F +  +            R QE  + + +     ++  +P + G+  I  +  +I +I++G+  +  ++   +L
Sbjct:    8 TILLLVCISCLLIA--AW---RSTSQRGKEPPGPTPIPIIGNVFQLNPWDLMGSFKELSKKYGPIFTIHLGPKKIVVLYGYDIVKEALIDNGEAFSGRGILPLIEKL---FKGTGIVTSN-GETWRQLRRFALTTLRDFGMGKKGIEERIQEEAHFLVERIRKTHE--EPFNPGKFLIHAVANIICSIVFGDRFDYEDKKFLDL 200          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: CP2F2_RAT (Cytochrome P450 2F2 OS=Rattus norvegicus GN=Cyp2f2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 58/213 (27.23%), Postives = 105/213 (49.30%), Query Frame = 3
Query:   54 TAIITCLVSV--LAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDP-PIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRD--------LYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNL 659
            TAI+  L++V  L++ + +W          +LPPGP+ LP +G L  L + DL    T+L   YG +F ++LG +  +V+S    VK+ + D+   F+ R   PI        GN IA+S+ G  W  LR+F V +++ N      + + K+ ++  I +        L   + K   P+ I   S+S ++C   ++++G   +  +E +  +
Sbjct:    6 TAILLLLLAVISLSLTFTSWG-------KGQLPPGPKPLPILGNLLQLRSQDLLTSLTKLSKDYGSVFTVYLGPRRVIVLSGYQTVKEALVDKGEEFSGRGSYPI--FFNFTKGNGIAFSD-GERWKILRRFSV-QILRN------FGMGKRSIEERILEEGSFLLDVLRKTEGKPFDPVFILSRSVSNIIC---SVIFGSRFDYDDERLLTI 198          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: CP2CS_MESAU (Cytochrome P450 2C28 OS=Mesocricetus auratus GN=CYP2C28 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 61/251 (24.30%), Postives = 110/251 (43.82%), Query Frame = 3
Query:   51 DTAIITCLVSVLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADR-DPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKM----MSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTP--NISDVFPVLSWFDIQGIERKAKK 782
            D  ++  L     + +  W  +  R    +LPPGP  LP +G +  +   D+ K       VYGP+F L+ G K  VVV     VK+ + D    F+ R + PI   + +  G  I +SN G +W +LR+F +  +    M   S++ C    ++E +  + +L   +     P      + S ++C   ++++    +  ++   N    L  KL E   ++ +P   + +V P    + + G   KA K
Sbjct:    2 DPVLVLVLTLSCLLLFSVWRQSSGR---GRLPPGPTPLPLIGNILQIDIKDISKSLANFSKVYGPVFTLYFGTKPTVVVHGYEAVKEALEDLGEEFSGRGNFPIVERMNS--GLGIIFSN-GTKWKELRRFSLMTLRNFGMGKRSIEDCI---QEEARCLVEELRKTNGSPCDPTFFLSCAPSNVIC---SVVFHNRFDYNDKNFLN----LMEKLNENFEILNSPWLQVCNVIPAFLDY-LPGSHNKALK 235          
The following BLAST results are available for this feature:
BLAST of CF831954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
C71C1_MAIZE2.957e-1126.14Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71BP_ARATH2.957e-1123.97Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
CP254_MOUSE3.862e-1129.07Cytochrome P450 2C54 OS=Mus musculus GN=Cyp2c54 PE... [more]
CP2H1_CHICK8.604e-1128.43Cytochrome P450 2H1 OS=Gallus gallus GN=CYP2H1 PE=... [more]
CP2F2_RAT8.604e-1127.23Cytochrome P450 2F2 OS=Rattus norvegicus GN=Cyp2f2... [more]
CP2CS_MESAU8.604e-1124.30Cytochrome P450 2C28 OS=Mesocricetus auratus GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01B08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831954 ID=CF831954; Name=CF831954; organism=Citrus sinensis; type=EST; length=832bp
CCCTAACTAAAATCGAAATGGCTTTGCGGGTCGATGATGCCAGCAGCAAT
GACACTGCAATTATCACTTGTTTAGTTTCTGTGCTTGCCGTGGCTTATTT
CGCATGGAATGTGAACAAATCAAGGAAAGCAAATGCTAAACTTCCACCAG
GACCTCGCGGCTTGCCTGCAGTCGGATACCTCCCATTTCTCGGAACTACT
GACTTGCACAAGAAATTCACGGAATTATGTGGAGTTTACGGTCCGATCTT
CAAGCTCTGGCTCGGAAATAAATTATGTGTCGTGGTGAGCTCACCTTCCC
TAGTTAAACAAGTGGTTCGTGATCAAGATACAACGTTCGCAGACCGTGAC
CCGCCGATCGCTGGGCTAGTGGCCACCTTTGGTGGCAATGATATTGCATG
GTCCAATTACGGTCCCGAATGGAGTAAGTTGCGCAAATTTTTTGTGGGCA
AGATGATGAGTAACGCAAGCCTTGATGCTTGTTATGCTCTAAGAAAACAA
GAGGTTAAAAATACTATCAGGGATTTGTATAACAACGACAACAAAATTGG
TAAGCCCATTGACATTGGTGAATTGTCAATTTCAACCTTGGTATGTGTTA
TTCAGAACATACTGTGGGGTGAAGCGCTTGAAATAAGAGAGGAAGGGATC
ACTAATCTTGGGGCTGAGCTAAAATTTAAGCTGGCAGAACTCATGGTCCT
AATGGGAACACCGAATATTTCGGACGTCTTTCCAGTGCTTTCATGGTTTG
ATATACAAGGTATAGAGAGGAAAGCAAAGAAGATTTCTCTCTGGTTTGAA
AATATTATAAATTCTACTGTTGAAAAGTATAG
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