CF831954

Overview
NameCF831954
Unique NameCF831954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9328 contig Csv1_Contig9328:204..1035. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 63/236 (26.69%), Postives = 112/236 (47.46%), Query Frame = 3
Query:  138 KLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPV-LSWF--DIQG----IERKAKKISLWFENIINSTVE 824
            KLPPGP GLP +G L  LG   LH  F +L   +GP+  L  G    VV+SS    KQV++ +D     R   +A  + T    DIA++ YG +W +++K  VG  + N      +   ++E  + +    +  ++    +D+ +   S    +I  + +G+    RE    ++   L+  + E    + +   +D FP  L W    I G    IE+   K++ +F+++I+  ++
Sbjct:   29 KLPPGPTGLPIIGNLHQLGRL-LHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKK-LVGLELFNPKKHKFFRYIREEEGDLLVKKLSKSSQTQTLVDLRKAFFSFTAGIIFRVSFGQ--NFRECDFIDMD-RLEELVQESETNVFSFAFTDFFPTGLGWLVDRISGQHSRIEKAFSKLTKFFQHVIDEELK 259          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 65/258 (25.19%), Postives = 117/258 (45.35%), Query Frame = 3
Query:   60 IITCLVSVLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPVLSWFD-IQGIERKAKKISLWFENIINSTVEKY 830
            ++ C + ++ + +F    ++ +K+NA  PP P  LP +  L  LG    H+    L   YGP+  L  G+   +VVSS    K V++  D  FA R          + G D+A + YG  W +++   V  + SN  + +   +R++E+   I  +     +I   + I    I  LV +  N++   AL  +  G T    + K  +  L  L+G  ++      L+W D I+G++ +  KIS   +  +   V+ +
Sbjct:    9 LLLCSIILITILFFK-KQSRGKKSNA--PPSPPRLPLIRNLHQLGRHP-HRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKI-----RISSSLRINLSEI--LVNLTNNVICRVALGRKYGGKT----DFKDLMKRLTRLLGEFSVGSYVSWLAWIDWIRGLDGQLIKISNDLDEFLERVVQDH 251          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = 3
Query:   72 LVSVLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRK-----FFVGKMM 458
            L+++ A    +  ++K R    KLPPGP  +P  G    +G    H+  T+L   +G IF L +G +  VVVSSP+L K+V+  Q   F  R   +   + T  G D+ ++ YG  W K+R+     FF  K++
Sbjct:   10 LLALFAAIIASIFISKLRGKRFKLPPGPVPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVV 143          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 45/155 (29.03%), Postives = 71/155 (45.81%), Query Frame = 3
Query:   72 LVSVLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNN 536
            L+ + A    A  V+K R    KLPPGP  +P  G    +G    H+  ++    +G IF L +G +  VVVSSP L K+V+  Q   F  R   +   + T  G D+ ++ YG  W K+R+       +N  +       ++E    + D+  N
Sbjct:   10 LLGLFAAIIVASIVSKLRGKKFKLPPGPIPVPVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAARVVEDVKKN 164          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 45/163 (27.61%), Postives = 73/163 (44.79%), Query Frame = 3
Query:   72 LVSVLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPI 560
            L++V      A  ++K R    KLPPGP  +P  G    +G    H+   +    +G +F L +G +  VVVSSP L K+V+  Q   F  R   +   + T  G D+ ++ YG  W K+R+       +N  +       + E  + + D+  N +   K I
Sbjct:   10 LIAVFVAVILATVISKLRGKKLKLPPGPIPIPIFGNWLQVGDDLNHRNLVDYAKKFGDLFLLRMGQRNLVVVSSPDLTKEVLLTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNREGWEFEAASVVEDVKKNPDSATKGI 172          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.568e-12
Identity = 59/239 (24.69%), Postives = 110/239 (46.03%), Query Frame = 3
Query:  120 SRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPVLSWF--DIQGIERKAKKISLWFENIINSTVEKY 830
            +R     LPPGP  LP +G L  LG+      F +L   YG +  L  GN   VV S+P  VK V++  D     R         T+  ND+A+S Y   W ++RK  V ++ +   + +   +R++EV + + D       + K +++ +  +     VI  + +G +LE  +  + N   E+   +   M ++G    +D FP++      I G+  K +K+    ++  + +++ +
Sbjct:   22 TRTTKKNLPPGPPRLPIIGNLHQLGSKPQRSLF-KLSEKYGSLMSLKFGNVSAVVASTPETVKDVLKTFDAECCSRPYMTYPARVTYNFNDLAFSPYSKYWREVRKMTVIELYTAKRVKSFQNVRQEEVASFV-DFIKQHASLEKTVNMKQKLVKLSGSVICKVGFGISLEWSK--LANTYEEV---IQGTMEVVGRFAAADYFPIIGRIIDRITGLHSKCEKVFKEMDSFFDQSIKHH 253          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12
Identity = 43/142 (30.28%), Postives = 66/142 (46.48%), Query Frame = 3
Query:  111 VNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNN 536
            V+K R    KLPPGP  +P  G    +G    H+  T+L   +G I  L +G +  VVVSSP L K+V+  Q   F  R   +   + T  G D+ ++ YG  W K+R+       +N  +       ++E    + D+  N
Sbjct:   23 VSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKN 164          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12
Identity = 45/134 (33.58%), Postives = 67/134 (50.00%), Query Frame = 3
Query:   72 LVSVLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRK-----FFVGKMM 458
            LV++ A    A  ++K R    KLPPGP  +P  G    +G    H+  T+L   +G I  L +G +  VVVSSP L K+V+  Q   F  R   +   + T  G D+ ++ YG  W K+R+     FF  K++
Sbjct:   10 LVALFAAIIGAILISKLRGKKFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVV 143          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: CP2F3_CAPHI (Cytochrome P450 2F3 OS=Capra hircus GN=CYP2F3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12
Identity = 69/267 (25.84%), Postives = 128/267 (47.94%), Query Frame = 3
Query:   63 ITCLVSVLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRD-----LYNNDNKIGKPID---IGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTP--NISDVFP-VLSWFDIQGIERKAKKISLWFENIINSTVEKY 830
            I+  + +L +A     +  S K   +LPPGPR LP +G L  L + D+    T+L   +G ++ ++LG +  VV+S    VK+ + DQ   F+ R    A    T  GN IA+SN G  W  LRK+ + +++ N      + + K+ ++  I +     L       GKP D   +   S+S ++C   ++++G   +  ++ +      +   + E   +M +P   + ++FP +L W  + G  R+  K     +N+I  +V ++
Sbjct:    4 ISTAILLLILALICLLLTTSSKGKGRLPPGPRALPFLGNLLQLRSQDMLTSLTKLSKEFGAVYTVYLGPRRVVVLSGYQAVKEALVDQAEEFSGRGDYPAFFNFT-KGNGIAFSN-GDRWKALRKYSL-QILRN------FGMGKRTIEERILEEGHFLLEELRKTQGKPFDPTFVVSRSVSNIIC---SVIFGSRFDYDDDRLLT----IIHLINENFQIMSSPWGEMYNIFPNLLDW--VPGPHRRLFKNYGRMKNLIARSVREH 252          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12
Identity = 63/242 (26.03%), Postives = 111/242 (45.87%), Query Frame = 3
Query:  114 NKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVA-TFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFP----VLSWFDIQGI----ERKAKKISLWFENIIN 812
            +K R+ + + PP P G P +G L  LG    H+    L   YG +  L  G+   VVVSS    KQV++  D     R P +AG  A ++   DIA+S +   W +LR+  V ++ S   + +   +++ EVK  I D  +     G P+++ E   S  V V     +G    +  +G        +  + +  + +G+ + SD FP    ++ W  + G+    ER  + +  ++E + +
Sbjct:   22 HKKRQQHQRKPPSPPGFPIIGNLHQLGELP-HQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSR-PSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVKKLI-DSVSESASQGTPVNLSEKFTSLTVRVTCKATFG----VNFQGTVLNSDRFEKLIHDTYLFLGSFSASDYFPNGGWIIDW--LTGLHGQRERSVRALDAFYEQMFD 254          
The following BLAST results are available for this feature:
BLAST of CF831954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
C71B8_ARATH7.039e-1326.69Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71AO_ARATH7.039e-1325.19Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
TCMO_ZINEL1.201e-1232.84Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_CATRO1.201e-1229.03Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_ARATH1.201e-1227.61Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C71BE_ARATH1.568e-1224.69Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
TCMO_POPTM2.675e-1230.28Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_HELTU2.675e-1233.58Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
CP2F3_CAPHI2.675e-1225.84Cytochrome P450 2F3 OS=Capra hircus GN=CYP2F3 PE=2... [more]
C71BX_ARATH2.675e-1226.03Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01B08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831954 ID=CF831954; Name=CF831954; organism=Citrus sinensis; type=EST; length=832bp
CCCTAACTAAAATCGAAATGGCTTTGCGGGTCGATGATGCCAGCAGCAAT
GACACTGCAATTATCACTTGTTTAGTTTCTGTGCTTGCCGTGGCTTATTT
CGCATGGAATGTGAACAAATCAAGGAAAGCAAATGCTAAACTTCCACCAG
GACCTCGCGGCTTGCCTGCAGTCGGATACCTCCCATTTCTCGGAACTACT
GACTTGCACAAGAAATTCACGGAATTATGTGGAGTTTACGGTCCGATCTT
CAAGCTCTGGCTCGGAAATAAATTATGTGTCGTGGTGAGCTCACCTTCCC
TAGTTAAACAAGTGGTTCGTGATCAAGATACAACGTTCGCAGACCGTGAC
CCGCCGATCGCTGGGCTAGTGGCCACCTTTGGTGGCAATGATATTGCATG
GTCCAATTACGGTCCCGAATGGAGTAAGTTGCGCAAATTTTTTGTGGGCA
AGATGATGAGTAACGCAAGCCTTGATGCTTGTTATGCTCTAAGAAAACAA
GAGGTTAAAAATACTATCAGGGATTTGTATAACAACGACAACAAAATTGG
TAAGCCCATTGACATTGGTGAATTGTCAATTTCAACCTTGGTATGTGTTA
TTCAGAACATACTGTGGGGTGAAGCGCTTGAAATAAGAGAGGAAGGGATC
ACTAATCTTGGGGCTGAGCTAAAATTTAAGCTGGCAGAACTCATGGTCCT
AATGGGAACACCGAATATTTCGGACGTCTTTCCAGTGCTTTCATGGTTTG
ATATACAAGGTATAGAGAGGAAAGCAAAGAAGATTTCTCTCTGGTTTGAA
AATATTATAAATTCTACTGTTGAAAAGTATAG
back to top