CF831955

Overview
NameCF831955
Unique NameCF831955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP27A_MOUSE (Sterol 26-hydroxylase, mitochondrial OS=Mus musculus GN=Cyp27a1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 46/158 (29.11%), Postives = 78/158 (49.37%), Query Frame = -1
Query:  224 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSG--NNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG 691
            L + P++ + + +E+  VV      +      +  L AV+KET RL+P +P        +   I G+  PK+T  +L  + + RDP ++  P  F+P R+L    + + D  G  + F  +PFG G R C G  +AE  +  +L+ L+  +E  L  G
Sbjct:  353 LSKSPEIQEALHKEVTGVVPFGKVPQHKDFAHMPLLKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQFVLCHYVVSRDPSVFPEPNSFQPHRWLR---KKEADNPGILHPFGSVPFGYGVRSCLGRRIAELEMQLMLSRLVQKYEIALAPG 507          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP237_MOUSE (Cytochrome P450 2C37 OS=Mus musculus GN=Cyp2c37 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 49/152 (32.24%), Postives = 79/152 (51.97%), Query Frame = -1
Query:  245 LMQHPQVMKKVQEELAQVVGM--DSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLN-VGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            L+++P V  KVQ+E+  V+G     C+++    ++ Y DA++ E  R    +P  +P   +       Y IPK TT++ ++ ++  D   + NP  F P  FL+  G   K DY      ++PF +G+R+CAG  LA   L   L S+L SF
Sbjct:  313 LLKYPHVTAKVQKEIEHVIGKHRSPCMQD--RSRMPYTDAMIHEVQRFIDLIPNSLPHEVTCDIKFRNYFIPKGTTVITSLSSVLHDSTEFPNPEVFDPGHFLDGNGKFKKSDY------FMPFSTGKRICAGEGLARMELFLFLTSILQSF 456          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP131_DROME (Probable cytochrome P450 313a1 OS=Drosophila melanogaster GN=Cyp313a1 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 47/153 (30.72%), Postives = 75/153 (49.02%), Query Frame = -1
Query:  242 LMQHPQVMKKVQEELAQVV--GMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLE-FRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE 691
            L  HP+  + V EEL  V        +    + KL YL+ V+KET RL PA+P+      ++     G  IPK   + ++++  HR+P++W    + F P+ FL   +E K  Y+     Y+PF  G+R C G   A     F L  +L +++
Sbjct:  313 LANHPEHQEAVFEELNGVFPDAGHFGITYPDMQKLDYLERVIKETLRLIPAIPITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADNFNPDNFLAENMEQKHPYA-----YIPFARGKRNCIGSKYAMMSSKFALCRILRNYK 460          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: C513C_DICDI (Probable cytochrome P450 513C1 OS=Dictyostelium discoideum GN=cyp513c1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 44/137 (32.12%), Postives = 66/137 (48.18%), Query Frame = -1
Query:  185 LKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSENFGIVI 595
            + YL  VVKE FR++PA  L +P   SE   I G+ I K T ++ N+++ HR    W NP  F PER +   V             + F  G R C G+ L+E  +   +A L  +F++  P+   LN    F + +
Sbjct:  356 IPYLALVVKEVFRMYPAGILGLPHMTSEDCEIQGHKIAKGTQIIQNIYSTHRSESFWPNPNNFIPERHIQNDVSKS----------VHFAVGTRNCMGMSLSEAEVHTAMAELFGNFKFTNPSNIPLNDQGTFSVAL 482          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP51_USTMA (Lanosterol 14-alpha demethylase OS=Ustilago maydis GN=ERG11 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13
Identity = 62/221 (28.05%), Postives = 93/221 (42.08%), Query Frame = -1
Query:  128 LMQHPQVMKKVQEELAQVV-----GMDSCVEEFHLPKLKYLDAVVKETFRLHPAL--------------PLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGV--------ESKFDY------SGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSENFGIVIKKKEPLIAIPTPRLSNSEL 691
            L   P++++++ EE   V      G+     E     +  LDAVVKET RLHP L              P L    +++S     Y IPK   +M        DPQ+W +  +F P R+L+           E K D+      +G N  YLPFG+GR  C G   A   +  +LA+ +  F+W L +    +      +V+  K     + TPR  +  L
Sbjct:  341 LASRPEIIEELYEEQLNVYSDGHGGLRELDYETQKTSVPLLDAVVKETLRLHPPLHSIMRYVKSDLAVPPTLSSPTSTKSEPDAHYVIPKGHYIMAAPGVSQVDPQIWKSSDQFDPHRWLDATTAAAMQDSGEDKQDFGFGMISTGANSPYLPFGAGRHRCIGEQFAYLQIGVILATFVRIFKWHLDSKFP-DPDYQSMVVLPSKNGCAIVLTPRAESLHL 560          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP4AP_PIG (Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13
Identity = 42/150 (28.00%), Postives = 72/150 (48.00%), Query Frame = -1
Query:  242 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE 691
            L  HP+  ++ +EE+  ++G  + +   HL ++ Y    +KE  RL+P +P +    +       G ++P    L L+V+++H +PQ+W NP EF P RF             ++  ++PF  G R C G   A   +   +A  L  FE
Sbjct:  331 LASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGIILSLSVYSLHHNPQVWPNPEEFDPSRFAPGSAR-------HSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFE 473          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP2CB_RAT (Cytochrome P450 2C11 OS=Rattus norvegicus GN=Cyp2c11 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13
Identity = 48/150 (32.00%), Postives = 77/150 (51.33%), Query Frame = -1
Query:  245 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            L++H  V  KVQEE+ +V+G +         ++ Y DAVV E  R    +P  +P   +       Y IPK T +++++ +I  D + + NP +F P  FL+  G   K DY      ++PF +G+R+CAG  LA   L     ++L +F
Sbjct:  313 LLKHVDVTAKVQEEIERVIGRNRSPCMKDRSQMPYTDAVVHEIQRYIDLVPTNLPHLVTRDIKFRNYFIPKGTNVIVSLSSILHDDKEFPNPEKFDPGHFLDERGNFKKSDY------FMPFSAGKRICAGEALARTELFLFFTTILQNF 456          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP2B5_RABIT (Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CYP2B5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13
Identity = 44/154 (28.57%), Postives = 74/154 (48.05%), Query Frame = -1
Query:  230 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 691
            ++++P V ++VQ+E+ QV+G           K+ Y DAV+ E  RL   +P   P   ++     GY IPK+T +   + +   DP+ ++ P  F P  FL+     K      N  ++PF  G+R+C G  +A   L     ++L +F    P
Sbjct:  314 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLVPFGAPHMVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDADGALK-----RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 462          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: C4AC3_DROME (Probable cytochrome P450 4ac3 OS=Drosophila melanogaster GN=Cyp4ac3 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13
Identity = 49/173 (28.32%), Postives = 90/173 (52.02%), Query Frame = -1
Query:  173 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSENFGIVIKKKE 691
            L  H  V ++  EEL  +      V  F   +L +L+ V+KE+ RL P+ P+ + R   E   + G  +PK+  + ++++ I RD + +  P +F PERFL      +   + + F ++PF +G R C G       +  +LA+++ +F+  LPA    +L+   GIV++ ++
Sbjct:  333 LALHADVQERCYEELQDLPEDIDEVSMFQFNELIHLECVIKESLRLFPSAPI-IGRTCIEESVMNGLVLPKNAQISIHIYDIMRDARHFPKPNQFLPERFL-----PENSVNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVIRNFKL-LPATQLEDLTFENGIVLRTQQ 498          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: C12C1_DROME (Probable cytochrome P450 12c1, mitochondrial OS=Drosophila melanogaster GN=Cyp12c1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13
Identity = 52/163 (31.90%), Postives = 85/163 (52.15%), Query Frame = -1
Query:  218 LMQHPQVMKKVQEE-LAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNN----FQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTK 691
            L ++P+  ++++EE L+++  + S      +  L YL AV+KE+ RL+P +     R A     + GY IPK T L++    + +D +L+    EF PER+L    + K D   N     F YLPFG G RMC G  + +  +   +A+L+ +F  E    T+
Sbjct:  339 LAKNPEKQQRLREEVLSKLTSLHSEFTVEDMKSLPYLRAVIKESLRLYP-VTFGNARSAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYSTE 500          
The following BLAST results are available for this feature:
BLAST of CF831955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP27A_MOUSE1.788e-1329.11Sterol 26-hydroxylase, mitochondrial OS=Mus muscul... [more]
CP237_MOUSE1.788e-1332.24Cytochrome P450 2C37 OS=Mus musculus GN=Cyp2c37 PE... [more]
CP131_DROME1.788e-1330.72Probable cytochrome P450 313a1 OS=Drosophila melan... [more]
C513C_DICDI1.788e-1332.12Probable cytochrome P450 513C1 OS=Dictyostelium di... [more]
CP51_USTMA2.335e-1328.05Lanosterol 14-alpha demethylase OS=Ustilago maydis... [more]
CP4AP_PIG2.335e-1328.00Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2... [more]
CP2CB_RAT2.335e-1332.00Cytochrome P450 2C11 OS=Rattus norvegicus GN=Cyp2c... [more]
CP2B5_RABIT2.335e-1328.57Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CY... [more]
C4AC3_DROME2.335e-1328.32Probable cytochrome P450 4ac3 OS=Drosophila melano... [more]
C12C1_DROME2.335e-1331.90Probable cytochrome P450 12c1, mitochondrial OS=Dr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01B08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831955 ID=CF831955; Name=CF831955; organism=Citrus sinensis; type=EST; length=694bp
TTTTTTTTTGCCAATAAAATAGCAACGGAGGACTTTTATTAAAATATTAT
ATTACGATTGAACTTGAAATAACATATAAATCTTCCGATACTCACAAAAT
CATCACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTG
GTGTTGGAATAGCAATCAAAGGCTCTTTTTTCTTAATGACAATCCCAAAA
TTTTCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGA
GTGCAATAACGAAGCCAAAACAAACATCAGCATCCTCTCAGCTAGAGGAA
TCCCAGCACACATTCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTG
TTACCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTC
GGGTCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAG
CCCAAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCA
ATGCTGCCACTCTCGCTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGG
ATGCAGACGAAATGTTTCTTTCACCACAGCATCTAAATATTTCAATTTAG
GCAAATGAAATTCTTCAACACAACTGTCCATGCCCACAACTTGAGCTAAT
TCTTCCTGAACTTTCTTCATTACTTGTGGATGCTGCATCAACTC
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