CF831955

Overview
NameCF831955
Unique NameCF831955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10467 contig Csv1_Contig10467:1..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: C4AA1_DROME (Probable cytochrome P450 4aa1 OS=Drosophila melanogaster GN=Cyp4aa1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.983e-13
Identity = 46/171 (26.90%), Postives = 89/171 (52.05%), Query Frame = -1
Query:  182 LMQHPQVMKKVQEELAQVVGMDSCVEEF-HLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSENFGIVIK 691
            L Q+P+   +   ELA +    +       L +++Y++  +KE  RL+P++PL+  R+  E   +  +T+P  + + +  +A HR   ++ +P +F+PERF     E++  Y+     +LPF +G R C G   A   +  +++ LL S++  LP   K  ++  F I ++
Sbjct:  328 LTQNPECQDRCVLELATIFEDSNRAPTMTDLHEMRYMEMCIKEALRLYPSVPLIA-RKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENRHPYA-----FLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQL-LPVTGKTTIAATFRITLR 491          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: STCB_EMENI (Probable sterigmatocystin biosynthesis P450 monooxygenase STCB OS=Emericella nidulans GN=stcB PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13
Identity = 51/151 (33.77%), Postives = 81/151 (53.64%), Query Frame = -1
Query:  257 LMQHPQVMKKVQEELAQVVG--MDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESG-SIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLN---VGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASL 691
            ++  P+V K+V+ E+A + G   D   E     +L  L+AV+ E+ RL+ A P  +PR     G +IGGY IP DT +    W++ R+P +WD+   F   R+L+   +  ++K  ++       PFG G R C GI L  RM M + A++
Sbjct:  340 VLSRPEVQKQVEAEVATLEGELTDEACE-----RLPILNAVIDESLRLYGAAPGCMPRSPPSGGVTIGGYFIPDDTIVATQNWSLQRNPSIWDDADTFDHTRWLSNSRITDQAKLAFN-------PFGYGARQCLGIHLG-RMEMRLAAAM 477          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP7A1_HUMAN (Cholesterol 7-alpha-monooxygenase OS=Homo sapiens GN=CYP7A1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13
Identity = 52/175 (29.71%), Postives = 87/175 (49.71%), Query Frame = -1
Query:  224 ELMQHPQVMKKVQEELAQVV----------GMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSI----GGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGN----NFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG 694
            +++++P+ MK   EE+ + +          G   C+ +  L  L  LD+++KE+ RL  A   L  R A E  ++    G Y I KD  + L    +H DP+++ +PL F+ +R+L+   ++K  +  N     + Y+PFGSG  +C G   A   +   L  +L  FE EL  G
Sbjct:  300 QMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEG 472          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP2C7_RAT (Cytochrome P450 2C7 OS=Rattus norvegicus GN=Cyp2c7 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13
Identity = 50/153 (32.68%), Postives = 79/153 (51.63%), Query Frame = -1
Query:  245 LMQHPQVMKKVQEELAQVVGM--DSCVEEF-HLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            LM++P V  KVQEE+ +V+G     C+++  H+P   Y DA++ E  R    +P  +P   +       Y IPK T ++ ++ ++  D + + NP  F P  FL+  G   K DY      +LPF +G+R C G  LA   L   L ++L +F
Sbjct:  313 LMKYPHVTAKVQEEIDRVIGRHRSPCMQDRKHMP---YTDAMIHEVQRFINFVPTNLPHAVTCDIKFRNYLIPKGTKVLTSLTSVLHDSKEFPNPEMFDPGHFLDENGNFKKSDY------FLPFSAGKRACVGEGLARMQLFLFLTTILQNF 456          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: C519B_DICDI (Probable cytochrome P450 519B1 OS=Dictyostelium discoideum GN=cyp519b1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13
Identity = 57/199 (28.64%), Postives = 95/199 (47.74%), Query Frame = -1
Query:  173 LMQHPQVMKKVQEELAQVVGMD-SCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIG-GYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLN---------------VGVESKFDYS-GNNFQYL--------PFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSENFGIVIKKKE 691
            L+ +P V KK  +EL  VVG D   V   H+    Y  +++KE FR+    PL +PR + +   +  G  IPK T ++LN++ +     L   P +F+PER++N               V  ++  D S  +N ++         PF  G R C G+ +A+  +  V +++L +FE        ++ +E FG+ I  KE
Sbjct:  305 LINNPDVQKKAYQELISVVGKDCKFVTSNHIENCPYFISIIKEVFRIRSPGPLGLPRISIDDTYLSNGMFIPKGTQILLNIFGMGN--LLVSEPDQFKPERWINYKNQQQQKQQQQQQQVNNKNSIDSSESSNLEFFDDLEKVSNPFSLGPRNCVGMAIAKSSIYSVCSNILLNFELSSINNQIIDDNEVFGVSINPKE 501          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: THAS_PIG (Thromboxane-A synthase OS=Sus scrofa GN=TBXAS1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 51/162 (31.48%), Postives = 74/162 (45.68%), Query Frame = -1
Query:  209 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPK-LKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNL 691
            L  +P   +K+  E+          E   L + L YLD V+ ET R++P       R A+    + G  IP  T L + V A+H DP+ W +P  F PERF      ++       F YLPFG+G R C G+ L    +   L  +L  F +E    T++ L
Sbjct:  358 LATNPDCQEKLLREVDDFSKKHPSPEHCSLQQGLPYLDMVLSETLRMYPPA-FRFTREAARDCEVLGQRIPAGTVLEVAVGALHHDPKHWPHPETFDPERF-----TAEAQRLQQPFTYLPFGAGPRSCLGVQLGLLEIKLTLLHILRKFRFEACPETQVPL 513          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP6G1_DROME (Cytochrome P450 6g1 OS=Drosophila melanogaster GN=Cyp6g1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 50/156 (32.05%), Postives = 75/156 (48.08%), Query Frame = -1
Query:  254 ELMQHPQVMKKVQEEL--AQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGS-------IGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLL 694
            E+ +HP++ K++++E+  A V G  S   E  +  L+YL  VV E  R++P LP L     S  G           YT+   T + + ++A+H DP+ W NP +F PERF     ++    +     Y PFGSG   C G  +        L SLL
Sbjct:  327 EMAKHPEMQKRLRDEINEALVEGGGSLSYE-KIQSLEYLAMVVDEVLRMYPVLPFLDREYESVEGQPDLSLKPFYDYTLENGTPVFIPIYALHHDPKYWTNPSQFDPERFSPANRKNIVAMA-----YQPFGSGPHNCIGSRIGLLQSKLGLVSLL 476          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP4AB_HUMAN (Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 44/159 (27.67%), Postives = 78/159 (49.06%), Query Frame = -1
Query:  215 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL 691
            L  HP+  ++ +EE+  ++G  + +   HL ++ Y    +KE  RL+P +P +    ++      G ++PK   ++L+++ +H +P++W NP  F P RF     +       ++  +LPF  G R C G   A   L    A  L  FE  LP  T++
Sbjct:  337 LATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQ-------HSHAFLPFSGGSRNCIGKQFAMNELKVATALTLLRFEL-LPDPTRI 487          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP2W1_HUMAN (Cytochrome P450 2W1 OS=Homo sapiens GN=CYP2W1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 54/183 (29.51%), Postives = 83/183 (45.36%), Query Frame = -1
Query:  149 QHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG---TKLNLSENFGIVIK-KKEPLIAIPTP 685
            +HP V  +VQEEL +V+G            L Y  AV+ E  R    LP  VPR  +    +GG+ +PK T ++  + ++  D   W  P +F P  FL+        +      +LPF +GRR+C G  LA   L  + A LL  +    P G     L+ +      ++ + + L A+P P
Sbjct:  314 RHPDVQGRVQEELDRVLGPGRTPRLEDQQALPYTSAVLHEVQRFITLLPH-VPRCTAADTQLGGFLLPKGTPVIPLLTSVLLDETQWQTPGQFNPGHFLDAN-----GHFVKREAFLPFSAGRRVCVGERLARTELFLLFAGLLQRYRLLPPPGVSPASLDTTPARAFTMRPRAQALCAVPRP 490          
BLAST of CF831955 vs. ExPASy Swiss-Prot
Match: CP2BB_CANFA (Cytochrome P450 2B11 OS=Canis familiaris GN=CYP2B11 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 42/154 (27.27%), Postives = 73/154 (47.40%), Query Frame = -1
Query:  230 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 691
            ++++P + +++ +E+ QV+G           K+ Y DAV+ E  R    LP+ VP   ++     GY IPK T +   + +   DP  ++ P  F P+ FL+     K      N  ++PF  G+R+C G  +A   L     ++L +F    P
Sbjct:  314 MLKYPHIAERIYKEIDQVIGPHRLPSLDDRAKMPYTDAVIHEIQRFGDLLPIGVPHMVTKDICFRGYIIPKGTEVFPILHSALNDPHYFEKPDVFNPDHFLDANGALK-----KNEAFIPFSIGKRICLGEGIARMELFLFFTTILQNFSVASP 462          
The following BLAST results are available for this feature:
BLAST of CF831955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C4AA1_DROME3.983e-1326.90Probable cytochrome P450 4aa1 OS=Drosophila melano... [more]
STCB_EMENI5.202e-1333.77Probable sterigmatocystin biosynthesis P450 monoox... [more]
CP7A1_HUMAN5.202e-1329.71Cholesterol 7-alpha-monooxygenase OS=Homo sapiens ... [more]
CP2C7_RAT5.202e-1332.68Cytochrome P450 2C7 OS=Rattus norvegicus GN=Cyp2c7... [more]
C519B_DICDI5.202e-1328.64Probable cytochrome P450 519B1 OS=Dictyostelium di... [more]
THAS_PIG6.794e-1331.48Thromboxane-A synthase OS=Sus scrofa GN=TBXAS1 PE=... [more]
CP6G1_DROME6.794e-1332.05Cytochrome P450 6g1 OS=Drosophila melanogaster GN=... [more]
CP4AB_HUMAN6.794e-1327.67Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE... [more]
CP2W1_HUMAN6.794e-1329.51Cytochrome P450 2W1 OS=Homo sapiens GN=CYP2W1 PE=2... [more]
CP2BB_CANFA6.794e-1327.27Cytochrome P450 2B11 OS=Canis familiaris GN=CYP2B1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01B08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831955 ID=CF831955; Name=CF831955; organism=Citrus sinensis; type=EST; length=694bp
TTTTTTTTTGCCAATAAAATAGCAACGGAGGACTTTTATTAAAATATTAT
ATTACGATTGAACTTGAAATAACATATAAATCTTCCGATACTCACAAAAT
CATCACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTG
GTGTTGGAATAGCAATCAAAGGCTCTTTTTTCTTAATGACAATCCCAAAA
TTTTCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGA
GTGCAATAACGAAGCCAAAACAAACATCAGCATCCTCTCAGCTAGAGGAA
TCCCAGCACACATTCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTG
TTACCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTC
GGGTCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAG
CCCAAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCA
ATGCTGCCACTCTCGCTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGG
ATGCAGACGAAATGTTTCTTTCACCACAGCATCTAAATATTTCAATTTAG
GCAAATGAAATTCTTCAACACAACTGTCCATGCCCACAACTTGAGCTAAT
TCTTCCTGAACTTTCTTCATTACTTGTGGATGCTGCATCAACTC
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