CF831956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP8 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 8801) GN=atpG PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.063e-29 Identity = 63/112 (56.25%), Postives = 87/112 (77.68%), Query Frame = -1 Query: 235 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 570 DE+FRL T +GK+ VER+++ M+FEQDP QILDA++PLY+N+Q+LR LQE+ ASE+AARM+AMS A+DNA +L L+++YN+ RQA IT +L+E+VAGA AL Sbjct: 203 DEVFRLITRDGKLRVERETIAQEVSSFPQDMIFEQDPIQILDALLPLYINNQLLRGLQEAAASELAARMTAMSNASDNAGQLIGTLTLSYNKARQAAITQQLMEVVAGANAL 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_ACAM1 (ATP synthase gamma chain OS=Acaryochloris marina (strain MBIC 11017) GN=atpG PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.351e-28 Identity = 67/113 (59.29%), Postives = 88/113 (77.88%), Query Frame = -1 Query: 235 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 570 DE+FRLTT G+ VER+ + + P M+FEQ+P QILDA++PLY+N+Q+LRALQES ASE+AARM+AM+ A+DNA EL L+++YN+ RQA IT ELLE+V GAEAL Sbjct: 204 DEVFRLTTRGGQFQVERERMERGTPQEMPSDMIFEQNPIQILDALLPLYLNNQLLRALQESAASELAARMTAMNNASDNASELIGTLTLSYNKARQAAITQELLEVVGGAEAL 316
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROMT (ATP synthase gamma chain OS=Prochlorococcus marinus (strain NATL2A) GN=atpG PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.704e-28 Identity = 61/112 (54.46%), Postives = 88/112 (78.57%), Query Frame = -1 Query: 238 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 570 DE+FRLTT + ++I+E+D+ N+ P ++FEQ P Q+L+A++PLY+ +Q+LRALQES ASE+A+RM+AM+ A+DNA EL KNL++ YN+ RQA IT E+LE+V GA A Sbjct: 205 DEIFRLTTKDSQLIIEKDAAPSNEEPKLPSDIVFEQSPDQLLNALLPLYLQNQLLRALQESAASELASRMTAMNNASDNAKELAKNLTIDYNKARQAAITQEILEVVGGASA 316
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROM1 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain NATL1A) GN=atpG PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.704e-28 Identity = 61/112 (54.46%), Postives = 88/112 (78.57%), Query Frame = -1 Query: 238 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 570 DE+FRLTT + ++I+E+D+ N+ P ++FEQ P Q+L+A++PLY+ +Q+LRALQES ASE+A+RM+AM+ A+DNA EL KNL++ YN+ RQA IT E+LE+V GA A Sbjct: 205 DEIFRLTTKDSQLIIEKDAAPTNEEPKLPSDIVFEQSPDQLLNALLPLYLQNQLLRALQESAASELASRMTAMNNASDNAKELAKNLTIDYNKARQAAITQEILEVVGGASA 316
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP2 (ATP synthase gamma chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=atpG PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.756e-28 Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = -1 Query: 235 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 570 DE F L T GK VER+ V EL M+FEQDP IL+A++PLY+++Q+LRALQE ASE+AARM+AM+ A+DNA +L K L+++YN+ RQA IT EL E+VAGA AL Sbjct: 203 DETFNLITRGGKFQVEREKVATEVKELPADMIFEQDPKDILNALLPLYLSNQLLRALQEGAASELAARMTAMNNASDNASDLMKTLTLSYNKARQAAITQELSEVVAGANAL 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_SPIPL (ATP synthase gamma chain OS=Spirulina platensis GN=atpG PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.144e-27 Identity = 62/109 (56.88%), Postives = 85/109 (77.98%), Query Frame = -1 Query: 244 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 570 DE+FRLT+ GK V R+ V+ L+ M+FEQDP +IL+A++PL++ +Q+LRA QES ASE+AARM+AMS A+DNA +L K L+++YN+ RQA IT ELLE+VAGA Sbjct: 203 DEVFRLTSKGGKFDVTREKVSVEPEALAQDMIFEQDPVEILNALLPLFLTNQLLRAWQESTASELAARMTAMSNASDNASDLVKTLTLSYNKARQASITQELLEVVAGA 311
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_SYNY3 (ATP synthase gamma chain OS=Synechocystis sp. (strain PCC 6803) GN=atpG PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.493e-27 Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = -1 Query: 235 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 570 DE+FRL T GK VER+ V M+FEQDP QIL+A++PLY +Q+LRALQES ASE+AARM+AMS A+DNA +L L+++YN+ RQA IT ELLE+VAGA +L Sbjct: 203 DEIFRLITRGGKFQVEREKVEAPVESFPQDMIFEQDPVQILEALLPLYNTNQLLRALQESAASELAARMTAMSNASDNAGQLIGTLTLSYNKARQAAITQELLEVVAGANSL 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_TRIEI (ATP synthase gamma chain OS=Trichodesmium erythraeum (strain IMS101) GN=atpG PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.675e-27 Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = -1 Query: 235 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 570 DE+FRLT+ G+ V R++V+ M+FEQDP QILDA++PL++ +Q+LRA QES ASE+A+RM+AMS A+DNA EL L++AYN+ RQA IT E+LE+V GA AL Sbjct: 203 DEIFRLTSKGGEFEVSRETVSAAVKSFPRDMIFEQDPIQILDALLPLFLTNQLLRAWQESSASELASRMTAMSNASDNASELAGTLTLAYNKARQAAITQEILEVVGGANAL 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_SYNR3 (ATP synthase gamma chain OS=Synechococcus sp. (strain RCC307) GN=atpG PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.675e-27 Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = -1 Query: 235 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 570 DE+FR T EG++ VER S + + +L ++FEQ P+Q+LD ++PLY+ +Q+LR+LQES ASE+A+RM+AM+ A+DNA L K L++ YN+ RQA IT E+LE+V GA A+ Sbjct: 203 DEIFRFVTKEGELGVERSSASNQEDKLKSDLVFEQSPSQLLDVLLPLYLQNQVLRSLQESAASELASRMTAMNNASDNAKALAKELTLDYNKARQAAITQEILEVVGGASAM 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROM4 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9211) GN=atpG PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.157e-26 Identity = 58/112 (51.79%), Postives = 86/112 (76.79%), Query Frame = -1 Query: 238 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 570 DE+FRLTT +++VE+D+ N+ P ++FEQ P Q+L+A++PLY+ +Q+LRALQES ASE+A+RM+AM+ A+DNA EL K L++ YN+ RQA IT E+LE+V G+ + Sbjct: 205 DEMFRLTTKNSRLVVEKDAAPSNEQPKLPSDVVFEQSPDQLLNALLPLYLQNQLLRALQESAASELASRMTAMNNASDNAKELAKTLNLTYNKARQAAITQEILEVVGGSSS 316 The following BLAST results are available for this feature:
BLAST of CF831956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831956 ID=CF831956; Name=CF831956; organism=Citrus sinensis; type=EST; length=570bpback to top |