CF831956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROMA (ATP synthase gamma chain OS=Prochlorococcus marinus GN=atpG PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.114e-25 Identity = 55/110 (50.00%), Postives = 84/110 (76.36%), Query Frame = -1 Query: 244 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 570 DE+FR+TT + ++E+D N+ + P ++FEQ P Q+L++++PLY+ +Q+LRALQE+ ASE+A+RM+AM+ A+DNA EL K L++ YN+ RQA IT E+LE+V GA Sbjct: 205 DEIFRITTKGSRFVIEKDPAPANEEPVLPSDVVFEQSPDQLLNSLLPLYLQNQLLRALQEAAASELASRMTAMNNASDNAKELAKTLNLTYNKARQAAITQEILEVVGGA 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS9 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9902) GN=atpG PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.183e-24 Identity = 57/112 (50.89%), Postives = 84/112 (75.00%), Query Frame = -1 Query: 238 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 570 DE+F LTT++G++ VE + + N P ++FEQ P Q+L+A++PLY+ +Q+LR LQES ASE+A+RM+AM+ A+DNA EL K L++ YN+ RQA IT E+LE+V G+ A Sbjct: 203 DEIFNLTTDQGRLTVEPGTSSANTAPKIPSDIVFEQSPDQLLNALLPLYLQNQLLRCLQESAASELASRMTAMNNASDNAKELAKTLTLDYNKARQAAITQEILEVVGGSAA 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_SYNPX (ATP synthase gamma chain OS=Synechococcus sp. (strain WH8102) GN=atpG PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.183e-24 Identity = 58/113 (51.33%), Postives = 84/113 (74.34%), Query Frame = -1 Query: 235 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 570 DE+FRLTT +G++ VE + N P ++FEQ P Q+L+A++PLY+ +Q+LR+LQES ASE+A+RM+AM+ A+DNA EL K L++ YN+ RQA IT E+LE+ GA A+ Sbjct: 203 DEIFRLTTKDGRLTVEPGAGPANTEPKIPSDIVFEQTPEQLLNALLPLYLQNQLLRSLQESAASELASRMTAMNNASDNAKELAKTLTLDYNKARQAAITQEILEVAGGAAAV 315
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_SYNSC (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9605) GN=atpG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.443e-24 Identity = 58/113 (51.33%), Postives = 83/113 (73.45%), Query Frame = -1 Query: 235 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 570 DE+FRLTT +G + VE + N P ++FEQ P Q+L+A++PLY+ +Q+LR+LQES ASE+A+RM+AM+ A+DNA EL K L++ YN+ RQA IT E+LE+ GA A+ Sbjct: 203 DEIFRLTTKDGLLTVEPGAGPANTEPKIPSDIVFEQTPEQLLNALLPLYLQNQLLRSLQESAASELASRMTAMNNASDNAKELAKTLTLDYNKARQAAITQEILEVAGGAAAV 315
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_GLOVI (ATP synthase gamma chain OS=Gloeobacter violaceus GN=atpG PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.670e-24 Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = -1 Query: 238 DELFRLTTNEGKMIVERDSVTFN-KGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 570 DE F+L T G V R+ + E + +FEQDP Q+LDA++PLY+ S++L ALQES ASE+AARM+AMS A+DNA +L L++ YN+ RQA IT E+LE+V+GA A Sbjct: 203 DETFKLITKGGGFEVLREKQQVRTEPEFAADTIFEQDPTQLLDALLPLYLTSEVLHALQESSASELAARMTAMSAASDNAKKLLSTLTIVYNKARQASITQEILEVVSGANA 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROMM (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9313) GN=atpG PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.308e-23 Identity = 56/110 (50.91%), Postives = 82/110 (74.55%), Query Frame = -1 Query: 244 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 570 DE+FRLTT + ++ VE+ N+ P ++FEQ P Q+L+A++PLY+ +Q+LRALQES ASE+A+RM+AM+ A+DNA L K L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSRLTVEKGVGPANEQPPLPSDIIFEQSPEQLLNALLPLYLQNQMLRALQESAASELASRMTAMNNASDNAKALAKTLTLDYNKARQAAITQEILEVVGGS 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROM3 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9303) GN=atpG PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.308e-23 Identity = 56/110 (50.91%), Postives = 82/110 (74.55%), Query Frame = -1 Query: 244 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 570 DE+FRLTT + ++ VE+ N+ P ++FEQ P Q+L+A++PLY+ +Q+LRALQES ASE+A+RM+AM+ A+DNA L K L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSRLTVEKGVGPANEQPPLPSDIIFEQSPEQLLNALLPLYLQNQMLRALQESAASELASRMTAMNNASDNAKALAKTLTLDYNKARQAAITQEILEVVGGS 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_VIGUN (ATP synthase subunit gamma, chloroplastic (Fragment) OS=Vigna unguiculata PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.889e-22 Identity = 53/75 (70.67%), Postives = 61/75 (81.33%), Query Frame = -1 Query: 346 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTA 570 DE FRLTT EGK+ VERD V + SP++ FEQDP QILDA++PLY+NSQILRALQES ASE+AARMSAMS A Sbjct: 42 DEFFRLTTKEGKLTVERDVVRTKTTDYSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNA 116
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PELPB (ATP synthase gamma chain OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=atpG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.289e-18 Identity = 46/88 (52.27%), Postives = 66/88 (75.00%), Query Frame = -1 Query: 232 ELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEALT 495 E S ++E P+ I+D ++P ++N+QI R + ES A+E AARMSAM +AT+NA EL + L+++YN+ RQA IT EL EIV+GA+ALT Sbjct: 203 ESSSDYIYEPSPSAIIDELVPKHLNTQIWRMMLESSAAEQAARMSAMDSATENAKELMRTLNISYNRARQAAITTELSEIVSGADALT 290
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROA2 (ATP synthase gamma chain OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=atpG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.830e-17 Identity = 44/81 (54.32%), Postives = 63/81 (77.78%), Query Frame = -1 Query: 235 LFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 477 ++E PA I+D ++P ++N+Q+ R + ES A+E AARM+AM +AT+NA EL + L+++YN+ RQA IT EL EIVAGAEAL Sbjct: 209 IYEPSPASIIDVLVPKHLNTQVWRMMLESNAAEQAARMAAMDSATENAKELLRLLNISYNRARQAAITTELSEIVAGAEAL 289 The following BLAST results are available for this feature:
BLAST of CF831956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831956 ID=CF831956; Name=CF831956; organism=Citrus sinensis; type=EST; length=570bpback to top |