CF831956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_RUBXD (ATP synthase gamma chain OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = -1 Query: 235 FEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 474 F D IL ++P Y+ + + +AL ES A E ARM+AM ATDNA+EL L++ N+ RQA+IT E+ EI AGAEAL Sbjct: 208 FIPDADTILRRLIPQYVETLVWQALLESAAGEHGARMTAMKNATDNANELVDTLTLQMNKARQAQITREISEIAAGAEAL 287
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_POLNA (ATP synthase gamma chain OS=Polaromonas naphthalenivorans (strain CJ2) GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = -1 Query: 235 DSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 519 D + +K E S ++E D ++D ++ Y+ + + +A+ E+ ASE +ARM AM +ATDNA + L + YN+ RQA IT EL EIVAGA A+ Sbjct: 194 DRMQPDKTEHSWDYIYEPDAQTVIDELLVRYVEALVFQAVAENMASEQSARMVAMKSATDNAGSVIGELKLIYNKTRQAAITKELSEIVAGAAAV 288
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_MESFL (ATP synthase gamma chain OS=Mesoplasma florum GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = -1 Query: 235 FEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 474 FE ++L+ + LY+++ I + ES SE A+R AM AT+N EL+ NLS+ YN+ERQA IT E+ EIV+GA AL Sbjct: 200 FEPSAEEVLNNAVTLYLSTIIFGTIVESQVSEQASRRLAMENATNNGKELEYNLSIQYNRERQASITQEISEIVSGANAL 279
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_HAHCH (ATP synthase gamma chain OS=Hahella chejuensis (strain KCTC 2396) GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = -1 Query: 235 LFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 477 ++E D +LD ++ ++ SQ+ +A+ E+ A E AARM AM +ATDNA + L +AYN+ RQA IT E+ EIV+GA A+ Sbjct: 207 IYEPDAKGLLDGLLTRFIESQVYQAVVENNACEQAARMIAMKSATDNAGGIINELELAYNKARQAAITQEISEIVSGAAAV 287
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_DESOH (ATP synthase gamma chain OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = -1 Query: 235 EQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 471 E P +ILDAM+P + QI AL E+ SE AARM+AM A+ +++ L++ YN+ RQA IT EL++IV GAEAL Sbjct: 218 EPSPDEILDAMLPKNVFIQIYSALLETSTSEHAARMAAMDNASKACNDMINELTLLYNKARQAAITAELMDIVGGAEAL 296
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_COLMA (ATP synthase gamma chain OS=Colwellia maris GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 37/81 (45.68%), Postives = 54/81 (66.67%), Query Frame = -1 Query: 235 LFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 477 ++E D +LD ++ Y+ SQ+ + + E+ A E A+RM +M ATDNA +L +L + YN+ RQA IT EL EIVAGA A+ Sbjct: 206 IYEPDANSLLDQLLVRYIESQVYQGVVENIACEQASRMVSMKAATDNAGDLIDDLQLVYNKARQAAITQELGEIVAGAAAV 286
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_BACCN (ATP synthase gamma chain OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = -1 Query: 235 FEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 474 FE +IL ++P Y S + AL + ASE AARM+AM +ATDNA E+ L++++N+ RQA IT E+ EIV GA AL Sbjct: 206 FEPSEEEILKVLLPQYAESLVYGALLDGKASEHAARMTAMKSATDNAMEVIDTLTLSFNRARQAAITQEITEIVGGAAAL 285
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_THIDA (ATP synthase gamma chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=atpG PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.949e-12 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = -1 Query: 235 LFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 477 ++E D ++DAM+ Y+ S + + + E+ ASE +ARM AM A+DNA + L + YN+ RQA IT EL EIVAGA A+ Sbjct: 210 IYEPDAKPVVDAMLMRYIESLVYQGVAENIASEQSARMVAMKAASDNAKNVIGELKLVYNKTRQAAITKELSEIVAGAAAV 290
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_STRMU (ATP synthase gamma chain OS=Streptococcus mutans GN=atpG PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.949e-12 Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = -1 Query: 235 FEQDPAQ--ILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 474 FE +P++ IL+ ++P Y S I A+ ++ +E AA M+AM TATDNAD++ ++L+ YN+ RQA IT E+ EIVAGA AL Sbjct: 210 FELEPSREAILEQLLPQYAESLIYGAIIDAKTAEHAAGMTAMQTATDNADKVIEDLTKLYNRVRQAAITQEITEIVAGANAL 291
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_STAES (ATP synthase gamma chain OS=Staphylococcus epidermidis (strain ATCC 12228) GN=atpG PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.949e-12 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = -1 Query: 235 FEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 474 FE D IL ++P Y+ S I + ++ ASE A+RM+AM A+DNA EL +LS+ YN+ RQA IT ++ EIV G+ AL Sbjct: 208 FEPDKESILSVILPQYVESLIYGTILDAKASEHASRMTAMRNASDNATELIDDLSLEYNRARQAAITQQITEIVGGSSAL 287 The following BLAST results are available for this feature:
BLAST of CF831956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831956 ID=CF831956; Name=CF831956; organism=Citrus sinensis; type=EST; length=570bpback to top |