CF831957

Overview
NameCF831957
Unique NameCF831957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP7 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7424) GN=atpG PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.222e-29
Identity = 67/112 (59.82%), Postives = 87/112 (77.68%), Query Frame = 2
Query:    2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337
            DE+  L T  GK  VER+ V+ +       M+FEQDP QILD+++PLY+N+Q+LRALQES ASE+AARM+AMS+A+DNA EL K LS++YN+ RQA IT E+LE+VAGA AL
Sbjct:  203 DEIFRLVTKGGKFQVEREKVSASVSSFPQDMIFEQDPVQILDSLLPLYLNNQLLRALQESAASELAARMTAMSSASDNAGELIKTLSLSYNKARQAAITQEILEVVAGANAL 314          
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP4 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=atpG PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.643e-29
Identity = 66/112 (58.93%), Postives = 86/112 (76.79%), Query Frame = 2
Query:    2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337
            DE+  LTT  G+  V+R+ V+     +   M+FEQDP QILDA++PLY+N+Q+LRALQES ASE+AARM+AM+ A+DNA EL K LS+ YN+ RQA IT E+LE+V GAEAL
Sbjct:  203 DEIFRLTTRGGRFEVQREKVSSATQSMPQDMIFEQDPLQILDALLPLYLNNQLLRALQESAASELAARMTAMNNASDNAKELIKGLSMTYNKARQAAITQEILEVVGGAEAL 314          
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_CYAA5 (ATP synthase gamma chain OS=Cyanothece sp. (strain ATCC 51142) GN=atpG PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.063e-29
Identity = 65/112 (58.04%), Postives = 87/112 (77.68%), Query Frame = 2
Query:    2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337
            DE+  L T EGK+ VER++VT         M+FEQDP QILDA++PLY+N+Q+LRALQE+ ASE+AARM+AMS A+DNA +L   L+++YN+ RQA IT +L+E+VAGA AL
Sbjct:  203 DEIFRLITREGKLQVERETVTQTMSSFPQDMIFEQDPVQILDALLPLYINNQLLRALQEAAASELAARMTAMSNASDNAGQLIGTLTLSYNKARQAAITQQLMEVVAGANAL 314          
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP1 (ATP synthase gamma chain OS=Synechococcus sp. (strain PCC 6716) GN=atpG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.764e-28
Identity = 65/112 (58.04%), Postives = 86/112 (76.79%), Query Frame = 2
Query:    2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337
            DE+  LTT    + V R+ VT N   L P M+FEQDP QILDA++PLY+++Q+LRALQE+ ASE+AARM+AM+ A+DNA  L   L+++YN+ RQA IT E+LE+VAGAEAL
Sbjct:  203 DEIFRLTTRASHLEVNREKVTSNLPALPPDMIFEQDPVQILDALLPLYLSNQLLRALQEAAASELAARMTAMNNASDNAQTLIGTLTLSYNKARQAAITQEILEVVAGAEAL 314          
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SYNJA (ATP synthase gamma chain OS=Synechococcus sp. (strain JA-3-3Ab) GN=atpG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.009e-28
Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = 2
Query:    2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337
            DE+  L    G+  VER  +        P M+FEQDP QILDA++PLY+N+Q+LRALQE+ ASE+AARM+AMS A+DNA EL + L +AYN+ RQA IT E+LE+VAGAEAL
Sbjct:  203 DEIFNLLVRGGEFTVERSKIVAAVSAPPPDMIFEQDPVQILDALLPLYLNNQLLRALQEAAASELAARMTAMSNASDNATELIRTLGLAYNKARQAAITQEILEVVAGAEAL 314          
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP6 (ATP synthase gamma chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpG PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 3.930e-28
Identity = 65/112 (58.04%), Postives = 86/112 (76.79%), Query Frame = 2
Query:    2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337
            DE+  LTT  G   VER+ +T     L   M+FEQDPAQIL A++PLY+++Q+LRALQE+ ASE+AARM+AM++A+DNA+ L   L++ YN+ RQA IT ELLE+VAGAEAL
Sbjct:  203 DEIFRLTTRGGSFTVEREKLTSEVAPLPRDMIFEQDPAQILSALLPLYLSNQLLRALQEAAASELAARMTAMNSASDNANALVGQLTLVYNKARQAAITQELLEVVAGAEAL 314          
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SYNE7 (ATP synthase gamma chain OS=Synechococcus elongatus (strain PCC 7942) GN=atpG PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.930e-28
Identity = 65/112 (58.04%), Postives = 86/112 (76.79%), Query Frame = 2
Query:    2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337
            DE+  LTT  G   VER+ +T     L   M+FEQDPAQIL A++PLY+++Q+LRALQE+ ASE+AARM+AM++A+DNA+ L   L++ YN+ RQA IT ELLE+VAGAEAL
Sbjct:  203 DEIFRLTTRGGSFTVEREKLTSEVAPLPRDMIFEQDPAQILSALLPLYLSNQLLRALQEAAASELAARMTAMNSASDNANALVGQLTLVYNKARQAAITQELLEVVAGAEAL 314          
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_MICAN (ATP synthase gamma chain OS=Microcystis aeruginosa (strain NIES-843) GN=atpG PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.951e-27
Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = 2
Query:    2 DELPMLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337
            DE+  L T EGK  V+R+ +     ++ P  M+FEQ+P QILD+++PLY+N+Q+LRALQES ASE+AARM+AMS A++NA EL   LS  YN+ RQA IT ELLE+VAGA AL
Sbjct:  203 DEIFRLVTKEGKFKVQREKMASQPAQVFPQDMIFEQNPVQILDSLLPLYLNNQLLRALQESAASELAARMTAMSNASENASELIGTLSRTYNKARQAAITQELLEVVAGANAL 315          
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_THEEB (ATP synthase gamma chain OS=Thermosynechococcus elongatus (strain BP-1) GN=atpG PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.327e-27
Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 2
Query:    2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337
            DE+  LTT    + V R+ VT     L   M+FEQDP QILDA++PLY+N+Q+LRALQE+ ASE+AARM+AM+ A+DNA  L   L+++YN+ RQA IT E+LE+VAGAEAL
Sbjct:  203 DEIFRLTTRGSHLEVNREKVTSTLPALPSDMIFEQDPLQILDALLPLYLNNQLLRALQEAAASELAARMTAMNNASDNAQALIGTLTLSYNKARQAAITQEILEVVAGAEAL 314          
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SYNJB (ATP synthase gamma chain OS=Synechococcus sp. GN=atpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.327e-27
Identity = 64/112 (57.14%), Postives = 82/112 (73.21%), Query Frame = 2
Query:    2 DELPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337
            DE+  L    G+  VER  V          M+FEQDP QILDA++PLY+N+Q+LRALQE+ ASE+AARM+AM+ A+DNA EL + L +AYN+ RQA IT E+LE+VAGAEAL
Sbjct:  203 DEIFRLLVRGGEFTVERSKVIAAVSAPPQDMIFEQDPVQILDALLPLYLNNQLLRALQEAAASELAARMTAMNNASDNASELIRTLGLAYNKARQAAITQEILEVVAGAEAL 314          
The following BLAST results are available for this feature:
BLAST of CF831957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_CYAP71.222e-2959.82ATP synthase gamma chain OS=Cyanothece sp. (strain... [more]
ATPG_CYAP44.643e-2958.93ATP synthase gamma chain OS=Cyanothece sp. (strain... [more]
ATPG_CYAA56.063e-2958.04ATP synthase gamma chain OS=Cyanothece sp. (strain... [more]
ATPG_SYNP11.764e-2858.04ATP synthase gamma chain OS=Synechococcus sp. (str... [more]
ATPG_SYNJA3.009e-2858.04ATP synthase gamma chain OS=Synechococcus sp. (str... [more]
ATPG_SYNP63.930e-2858.04ATP synthase gamma chain OS=Synechococcus sp. (str... [more]
ATPG_SYNE73.930e-2858.04ATP synthase gamma chain OS=Synechococcus elongatu... [more]
ATPG_MICAN1.951e-2757.52ATP synthase gamma chain OS=Microcystis aeruginosa... [more]
ATPG_THEEB3.327e-2757.14ATP synthase gamma chain OS=Thermosynechococcus el... [more]
ATPG_SYNJB3.327e-2757.14ATP synthase gamma chain OS=Synechococcus sp. GN=a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01B09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831957 ID=CF831957; Name=CF831957; organism=Citrus sinensis; type=EST; length=571bp
GGATGAGTTGCCTATGTTGACAACTAATGAAGGGAAGATGATTGTCGAGA
GAGATAGCGTGACATTCAATAAAGGGGAATTATCGCCTCTTATGCTGTTT
GAGCAAGATCCGGCTCAGATTCTTGATGCGATGATGCCACTCTATATGAA
TAGTCAGATTTTGAGGGCATTGCAGGAGTCATTCGCTAGTGAGGTTGCAG
CGAGGATGAGTGCCATGAGTACTGCTACGGATAATGCTGATGAGTTGAAG
AAAAATCTTTCAGTTGCTTATAACCAAGAACGCCAGGCTAAAATCACTGG
TGAACTATTGGAGATTGTTGCTGGAGCCGAGGCACTTACACAGTTTGATT
AATTTGACCCTTTGTTTTTCCTTGACTTGATTTTTCTATATCCCTTTTTT
TTGTTTGGGGGGGTTGAGAATATTGCAGTTCACATCATATGCTAGTTAGT
ATATTCATCATTGAACGCTGGTTTATAATTTGTATTGATGACTTGAGTAT
TTCATATGGTAAACTAGAATGTCCAACGAAAAGAAATAACATTGTTTTTT
CTGGCAAAAAAAAAAAAAAAA
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