CF831957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SHEFN (ATP synthase gamma chain OS=Shewanella frigidimarina (strain NCIMB 400) GN=atpG PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 95 LFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 ++E DP ++LD ++ Y+ SQ+ + + E+ ASE AARM AM ATDNA E+ +L + YN+ RQA IT EL EIV+GA A+ Sbjct: 206 IYEPDPKEVLDLLLTRYVESQVYQGVVENIASEQAARMVAMKAATDNAGEMIDDLQLVYNKARQAAITQELSEIVSGAAAV 286
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_RHISN (ATP synthase gamma chain OS=Rhizobium sp. (strain NGR234) GN=atpG PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 14 MLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 ++ + G + E DS S + +E D A IL ++P ++ QI RAL E+ A E+ A+MSAM AT NA E+ L++ YN++RQA+IT EL+EI++GAEAL Sbjct: 193 LIPASAGPVAAEADSA-------SAVYEYEPDAAAILTDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLNYNRQRQAQITKELIEIISGAEAL 293
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_HAEIG (ATP synthase gamma chain OS=Haemophilus influenzae (strain PittGG) GN=atpG PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 95 LFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 L+E +P +LD+++ Y+ SQI +A+ ++ ASE AARM AM ATDNA L +L + YN+ RQA IT EL EIVAGA A+ Sbjct: 209 LYEPEPKVLLDSLLVRYLESQIYQAVVDNLASEQAARMVAMKAATDNAGNLINDLRLVYNKARQASITNELNEIVAGAAAI 289
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_HAEIE (ATP synthase gamma chain OS=Haemophilus influenzae (strain PittEE) GN=atpG PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 95 LFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 L+E +P +LD+++ Y+ SQI +A+ ++ ASE AARM AM ATDNA L +L + YN+ RQA IT EL EIVAGA A+ Sbjct: 209 LYEPEPKALLDSLLVRYLESQIYQAVVDNVASEQAARMVAMKAATDNAGNLINDLRLVYNKARQASITNELNEIVAGAAAI 289
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_FLAPJ (ATP synthase gamma chain OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=atpG PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 95 LFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 +FE +I+ ++P + +Q+ + +++SFASE ARM+AM ATDNA EL+ L + YN+ RQA IT E+LEIV GAEAL Sbjct: 204 IFEPSKEEIVLTLIPKSLKTQLYKGIRDSFASEHGARMTAMHKATDNATELRDQLKLTYNKARQAAITNEILEIVGGAEAL 284
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_BARBK (ATP synthase gamma chain OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=atpG PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 40/80 (50.00%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 98 FEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 +E D A +L+ ++P +++ QI +AL E+ A E+ A+MSAM A+ NA E+ L+V YN++RQA+IT EL+EI+AGAEAL Sbjct: 223 YEPDVASLLNDLIPRHISVQIFQALLENVAGEMGAKMSAMDNASRNAGEMINKLTVTYNRQRQAQITTELIEIIAGAEAL 302
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_BACSK (ATP synthase gamma chain OS=Bacillus clausii (strain KSM-K16) GN=atpG PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 8 LPMLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPA--QILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 LP+ + NEG E S L+E +P+ QIL+A++P Y S I AL ++ ASE ARM+AMS ATDNA L L+++YN+ RQA IT E+ EIV GA AL Sbjct: 189 LPLASVNEGD-------------ETSSTSLYEFEPSEQQILEAVLPRYAESLIYGALLDAKASEFGARMTAMSAATDNASALIDELTLSYNRARQAAITQEITEIVGGAAAL 287
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SHESW (ATP synthase gamma chain OS=Shewanella sp. (strain W3-18-1) GN=atpG PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = 2 Query: 95 LFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 ++E DP +LD ++ Y+ SQ+ + + E+ ASE AARM AM ATDNA EL +L + YN+ RQA IT EL EIV+GA A+ Sbjct: 206 IYEPDPKVLLDTLLVRYIESQVYQGVVENIASEQAARMVAMKAATDNAGELINDLQLVYNKARQAAITQELSEIVSGASAV 286
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SHEPC (ATP synthase gamma chain OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=atpG PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = 2 Query: 95 LFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 ++E DP +LD ++ Y+ SQ+ + + E+ ASE AARM AM ATDNA EL +L + YN+ RQA IT EL EIV+GA A+ Sbjct: 206 IYEPDPKVLLDTLLVRYIESQVYQGVVENIASEQAARMVAMKAATDNAGELINDLQLVYNKARQAAITQELSEIVSGASAV 286
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SHELP (ATP synthase gamma chain OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=atpG PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 41/81 (50.62%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 95 LFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 L+E DP ++L+ ++ Y+ SQ+ + + E+ ASE AARM AM ATDNA EL +L + YN+ RQA IT EL EIV+GA A+ Sbjct: 206 LYEPDPKELLETLLVRYVESQVYQGVVENIASEQAARMVAMKAATDNAGELIDDLQLVYNKARQAAITQELSEIVSGAAAV 286 The following BLAST results are available for this feature:
BLAST of CF831957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831957 ID=CF831957; Name=CF831957; organism=Citrus sinensis; type=EST; length=571bpback to top |