CF831957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_PHATR (ATP synthase gamma chain, chloroplastic OS=Phaeodactylum tricornutum GN=ATPC PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.019e-24 Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 DE+ LT+ G+ VER + + P M+FEQDP QI++A++PLY+N QILR LQES ASE+AARM +M +A+DNA L K L++ YN+ RQA +T ELLEI++GA AL Sbjct: 257 DEVFQLTSESGQFGVERTELDVAAPQEFPNDMIFEQDPIQIVNAILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGSLAKQLNLEYNRARQAAVTQELLEIISGASAL 369
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_ODOSI (ATP synthase gamma chain, chloroplastic OS=Odontella sinensis GN=ATPC PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.019e-24 Identity = 60/113 (53.10%), Postives = 82/113 (72.57%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 DE+ LT++ G VER + + + P M+FEQDP QI+++++PLY+N QILR LQES ASE+AARM +M +A+DNA +L K LS YN+ RQA +T E+LEIV+GA AL Sbjct: 257 DEVFQLTSSGGDFEVERTELEVAEPQDFPNDMIFEQDPIQIINSILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGDLAKRLSTEYNRARQAAVTQEILEIVSGASAL 369
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_PROMP (ATP synthase gamma chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=atpG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.636e-24 Identity = 56/110 (50.91%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 328 DE+ LTT K++VE+ ++ N + P ++FEQ P Q+LD+++PLY+ +QILRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKNSKLLVEKSNIEKNDSDKLPSDIVFEQSPDQLLDSLLPLYLQNQILRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_PROM5 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9515) GN=atpG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.636e-24 Identity = 56/110 (50.91%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 328 DE+ LTT K++VE+ ++ N+ + P ++FEQ P Q+LD+++PLY+ +QILRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKNSKLLVEKSNLEKNESDRLPSDIVFEQSPDQLLDSLLPLYLQNQILRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_PROMS (ATP synthase gamma chain OS=Prochlorococcus marinus (strain AS9601) GN=atpG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.443e-24 Identity = 55/110 (50.00%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 328 DE+ LTT + K++VE+ ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_PROM9 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9312) GN=atpG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.443e-24 Identity = 55/110 (50.00%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 328 DE+ LTT + K++VE+ ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_PROM2 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9215) GN=atpG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.443e-24 Identity = 55/110 (50.00%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 328 DE+ LTT + K++VE+ ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_PROM0 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9301) GN=atpG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.443e-24 Identity = 55/110 (50.00%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 328 DE+ LTT + K++VE+ ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS3 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9311) GN=atpG PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.873e-24 Identity = 58/112 (51.79%), Postives = 82/112 (73.21%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 334 DE+ LTT EG++ VE S N P ++FEQ P Q+L+A++PLY+ +Q+LR+LQES ASE+A+RM+AM+ A+DNA EL K L++ YN+ RQA IT E+LE+V G+ A Sbjct: 203 DEIFRLTTKEGRLSVEAGSAPENSQPALPSDIVFEQSPDQLLNALLPLYLQNQLLRSLQESAASELASRMTAMNNASDNAKELAKTLTLDYNKARQAAITQEILEVVGGSAA 314
BLAST of CF831957 vs. ExPASy Swiss-Prot
Match: ATPG_SYNPW (ATP synthase gamma chain OS=Synechococcus sp. (strain WH7803) GN=atpG PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.232e-23 Identity = 57/113 (50.44%), Postives = 83/113 (73.45%), Query Frame = 2 Query: 2 DELPMLTTNEGKMIVERDSVTFN-KGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 337 DE+ LTT +G + VE S N + ELS ++FEQ P Q+L+A++PLY+ +Q+LR+LQE+ ASE+A+RM+AM+ A+DNA L K L++ YN+ RQA IT E+LE+ GA A+ Sbjct: 203 DEIFRLTTKDGDLRVETGSAPANAQPELSSEIVFEQSPDQLLNALLPLYLQNQVLRSLQEAAASELASRMTAMNNASDNAKALAKTLTLDYNKARQAAITQEILEVAGGAAAV 315 The following BLAST results are available for this feature:
BLAST of CF831957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831957 ID=CF831957; Name=CF831957; organism=Citrus sinensis; type=EST; length=571bpback to top |