CF831959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.894e-51 Identity = 88/126 (69.84%), Postives = 105/126 (83.33%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 DNGGWCNPP HFD+A P FL+IA+ RAGIVPIS+RR+ C K GGIRFT+NGH YFNLVLITNV GAGD+ S+KGSKTGW +++RNWGQNWQSN+ L+GQSL F++T+SD RT TS N+ P NW Sbjct: 122 DNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNW 247
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.473e-51 Identity = 89/124 (71.77%), Postives = 105/124 (84.68%), Query Frame = -1 Query: 269 GGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 640 GGWCNPP HFD+A+P FL+IAQ +AG+VP+ +RR+ C +KGGIRFT+NGHSYFNLVLITNV GAGDV SVSIKG+ T WQ+MSRNWGQNWQSN+ L GQ+L F++T SDGRTV SNN P NW Sbjct: 117 GGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNW 240
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.219e-51 Identity = 88/126 (69.84%), Postives = 104/126 (82.54%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 DNGGWCNPP +HFD+A P FL IA+ +AGIVP+S+RRIPC KKGGIRFT+NG YFNLVL+TNV GAGDV VS+KGS T W +SRNWGQNWQSN+ L+GQSL F++ SDGR+ TSNN+ P NW Sbjct: 120 DNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNW 245
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50 Identity = 88/132 (66.67%), Postives = 110/132 (83.33%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG------WQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D GGWCNPP +HFD+AEPAFL+IA+ AGIVP+SFRR+ CA+KGG+RFTVNGH+YFNLVL+TNVGGAGDV S+++KGS +G WQ MSRNWGQNWQSN+YL G++L F++TA DGR++T +V P W Sbjct: 117 DGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGW 248
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49 Identity = 86/126 (68.25%), Postives = 100/126 (79.37%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 DNGGWCNPP HFD+A P FL IA+ RAGIVP+S+RR+PC KKGG+RFT+NG YFNLVLITNV GAGD+ S+KG+ TGW MSRNWGQNWQSNS L+GQ+L F++T SD RT TS N P W Sbjct: 126 DNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGW 251
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49 Identity = 88/126 (69.84%), Postives = 103/126 (81.75%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D+GGWCNPP +HFD+A P FL+I RAGIVP+S+RR+PC K GGIRFTVNG YFNLVL+TNV GAGD++ VS+KGSKT W MSRNWGQNWQSN+ LIGQSL F++TASD R+ TS NV P W Sbjct: 124 DDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATW 249
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 3.949e-49 Identity = 84/126 (66.67%), Postives = 103/126 (81.75%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 DNGGWCNPP HFD+A P FL+IA+ RAGIVP+SFRR+PC K+GGIRFT+NG YFNLVL+TNV GAG++ + +KG+ T W MSRNWGQNWQSNS L+GQSL F++T+SD R+ TS N+ P NW Sbjct: 119 DNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANW 244
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.501e-48 Identity = 84/127 (66.14%), Postives = 105/127 (82.68%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D+GGWCNPP HFDM++P F +IA +AGIVP+S+RR+ C KKGGIRFT+NGHSYFNLVL+TNVGGAGDVH+V++K ++ WQA+SRNWGQNWQS + L GQ+L F++T DGR+V SNN VP W Sbjct: 153 DDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGW 279
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48 Identity = 83/126 (65.87%), Postives = 103/126 (81.75%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D GGWCNPP QHFDMAEPA+L+I GIVP+ ++R+PCAK+GG+RFT+NG YF LVL++NVGG G + SVSIKGS+TGW AMSRNWG NWQSN+YL GQSL F++T+SDG+T+T +V P W Sbjct: 123 DAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGW 248
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.696e-47 Identity = 81/129 (62.79%), Postives = 104/129 (80.62%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIK---GSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D GGWCNPP HFD+++PAFL+IA+ ++GIVP+S+RR+ C +KGG+RFT+NGHSYFNLVL++NVGGAGDVH+V++K G K WQAM+RNWGQNWQS + L GQ+L F +T D R+V S NV P W Sbjct: 124 DRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGW 252 The following BLAST results are available for this feature:
BLAST of CF831959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831959 ID=CF831959; Name=CF831959; organism=Citrus sinensis; type=EST; length=646bpback to top |