CF831959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.263e-12 Identity = 45/138 (32.61%), Postives = 73/138 (52.90%), Query Frame = -1 Query: 269 GGWCNPPFQHFDMAEPAFLQIAQS-------RAGIVPISFRRIPCAKKG-GIRFTVN--GHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSL----FFQLTASDGRTVTSNNVVPGNW 640 GG C HFDM+ + +A+ AGI+ + +RR+PC G I F V+ + ++ VLI G GD+++V + + GW M +NWG W+ NS G++L +LT+ G+ + +NNV+P +W Sbjct: 143 GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASW 279
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.860e-12 Identity = 42/141 (29.79%), Postives = 69/141 (48.94%), Query Frame = -1 Query: 269 GGWCNPPFQHFDMAEPAFLQIAQS-------RAGIVPISFRRIPCAKKG---GIRFTVNGHSYFNLVLITNVGGAGDVHSVSI-----KGSKTGWQAMSRNWGQNWQSNS--YLIGQSLFFQLTASDGRTVTSNNVVPGNW 640 GG C HFD++ AF +A+ AG +P+ + R+PC +G R + Y+ VL+ + G GD+ +V + G W AM ++WG W+ NS + + +LT+ GRT+ ++NV+P W Sbjct: 117 GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNSGPAPLQAPMSIRLTSGSGRTLVASNVIPAGW 257
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11 Identity = 43/138 (31.16%), Postives = 70/138 (50.72%), Query Frame = -1 Query: 269 GGWCNPPFQHFDMAEPAFLQIAQS-------RAGIVPISFRRIPCAKKGGIRFT----VNGHSYFNLVLITNVGGAGDVHSVSIK--GSKTGWQAMSRNWGQNWQSNSYLIGQSLF-FQLTASDGRTVTSNNVVPGNW 640 GG C HFD++ AF +A AG++ I + R+PC GG++ T V + + VL+ G GD+ V + G+ W M ++WG W+ N+ Q+ F +LT+S G+T+ ++NV+P W Sbjct: 116 GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGW 252 The following BLAST results are available for this feature:
BLAST of CF831959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831959 ID=CF831959; Name=CF831959; organism=Citrus sinensis; type=EST; length=646bpback to top |