CF831960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_HYLSY (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Hylobates syndactylus GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.360e-52 Identity = 96/203 (47.29%), Postives = 129/203 (63.55%), Query Frame = -2 Query: 200 VPATVAAGKNPTSKIVYDEYNHERYPPGDPSKR-------AFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 787 VPA+V + EY S R F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G Sbjct: 72 VPASVCYSHTDVKVPDFSEYRRPEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKRPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_RAT (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus GN=Uqcrfs1 PE=1 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 2.085e-51 Identity = 89/166 (53.61%), Postives = 121/166 (72.89%), Query Frame = -2 Query: 200 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 697 +++ F+Y V A + + +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP+Y F + +++G Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNAVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTSGDVVVVG 274
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_PANTR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan troglodytes GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.085e-51 Identity = 88/166 (53.01%), Postives = 122/166 (73.49%), Query Frame = -2 Query: 200 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 697 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_PANPA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan paniscus GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.085e-51 Identity = 88/166 (53.01%), Postives = 122/166 (73.49%), Query Frame = -2 Query: 200 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 697 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_HUMAN (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Homo sapiens GN=UQCRFS1 PE=1 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 2.085e-51 Identity = 88/166 (53.01%), Postives = 122/166 (73.49%), Query Frame = -2 Query: 200 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 697 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_GORGO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gorilla gorilla gorilla GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.085e-51 Identity = 88/166 (53.01%), Postives = 122/166 (73.49%), Query Frame = -2 Query: 200 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 697 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRIL_HUMAN (Cytochrome b-c1 complex subunit Rieske-like protein 1 OS=Homo sapiens GN=UQCRFSL1 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.067e-51 Identity = 88/166 (53.01%), Postives = 121/166 (72.89%), Query Frame = -2 Query: 200 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 697 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++IK +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPA NLEVP+Y F ++ +++G Sbjct: 118 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIKQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPATLNLEVPTYEFTSDDMVIVG 283
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_RHORU (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodospirillum rubrum GN=petA PE=1 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 3.329e-49 Identity = 98/183 (53.55%), Postives = 122/183 (66.67%), Query Frame = -2 Query: 200 EYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPN-----AGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 733 E H PG S R F++ G V A + L + F+ M+ + D LA+AS EVD+S+I G +TV WRGKPVF+R RT+++I +A +VD SLRDPQ D RV+ +WLV+VGVCTHLGCIPL GDF GWFCPCHGSHYD +GRIRKGPAP NL VP Y+F D+ +LIG Sbjct: 3 EAEHTASTPGGESSRRD--FLIYGTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQAITVTWRGKPVFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTHLGCIPLGQKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTVLIG 183
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_RICBR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia bellii (strain RML369-C) GN=petA PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.309e-45 Identity = 89/181 (49.17%), Postives = 119/181 (65.75%), Query Frame = -2 Query: 200 DEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 736 D N + D SK + F++ V A + + S++ S DVLA++S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V + L DP++D +RVK + WLV +G+CTHLGC+PL N GD+ GWFCPCHGS YD SGR+R+GPAP NL VP Y+F+ + K+ IG Sbjct: 6 DTNNDNKVEFEDRSKTSRRDFMVLTASSVAAVGAACTLWPLINSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEEDQDRVKAGHDNWLVTIGICTHLGCVPLANQGDYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG 186
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_RICFE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia felis GN=petA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 80/138 (57.97%), Postives = 103/138 (74.64%), Query Frame = -2 Query: 200 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 607 S++ S DVLA++S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V + L DP+ D RVK + WLV +G+CTHLGC+PL N G++ GWFCPCHGS YD SGR+R+GPAP NL VP Y+F+ + K+ IG Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTHLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG 177 The following BLAST results are available for this feature:
BLAST of CF831960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831960 ID=CF831960; Name=CF831960; organism=Citrus sinensis; type=EST; length=797bpback to top |