CF831961
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831961 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.000e-66 Identity = 125/145 (86.21%), Postives = 136/145 (93.79%), Query Frame = 1 Query: 247 RGFSSESLTTRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFITRRTEEDIKLANSVDLGSLRDPQQDAER 681 RGFSS S++ ++ LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFI RRTE+DI LANSVDLGSLRDPQQDAER Sbjct: 58 RGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAER 202
BLAST of CF831961 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 3.918e-66 Identity = 125/145 (86.21%), Postives = 136/145 (93.79%), Query Frame = 1 Query: 247 RGFSSESLTTRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFITRRTEEDIKLANSVDLGSLRDPQQDAER 681 RGFSS S++ ++ LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFI RRTE+DI LANSVDLGSLRDPQQDAER Sbjct: 44 RGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAER 188
BLAST of CF831961 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.140e-65 Identity = 124/144 (86.11%), Postives = 135/144 (93.75%), Query Frame = 1 Query: 250 GFSSESLTTRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFITRRTEEDIKLANSVDLGSLRDPQQDAER 681 GFSS S++ ++ LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFI RRTE+DI LANSVDLGSLRDPQQDAER Sbjct: 23 GFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAER 166
BLAST of CF831961 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.945e-65 Identity = 126/154 (81.82%), Postives = 138/154 (89.61%), Query Frame = 1 Query: 220 LGPQYQLPCRGFSSESLTTRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFITRRTEEDIKLANSVDLGSLRDPQQDAER 681 L Q+ RGFSS S++ ++ LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFI RRTEEDI LANSVDLGSLRDPQQDAER Sbjct: 45 LASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAER 198
BLAST of CF831961 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.332e-65 Identity = 125/154 (81.17%), Postives = 138/154 (89.61%), Query Frame = 1 Query: 220 LGPQYQLPCRGFSSESLTTRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFITRRTEEDIKLANSVDLGSLRDPQQDAER 681 L Q+ RGFSS S++ ++ LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFI RRT+EDI LANSVDLGSLRDPQQDAER Sbjct: 45 LASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAER 198
BLAST of CF831961 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 3.667e-64 Identity = 122/145 (84.14%), Postives = 135/145 (93.10%), Query Frame = 1 Query: 247 RGFSSESLTTRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFITRRTEEDIKLANSVDLGSLRDPQQDAER 681 RGFSS S++ ++ LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYAS +RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPGSTVTVKWRGKPVFI RRT++DIKLANSVDLG+LRDPQQDAER Sbjct: 51 RGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAER 195
BLAST of CF831961 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.628e-62 Identity = 118/146 (80.82%), Postives = 135/146 (92.47%), Query Frame = 1 Query: 247 RGFSS-ESLTTRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFITRRTEEDIKLANSVDLGSLRDPQQDAER 681 RGFSS E++ RN+++ + +PATVAAVKNP K+VYDEYNHERYPPGDPSKRAFAYFVL+GGRF+YASL+RLL+LKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFI RRTE+DIKLANSVD+ SLR P+QDAER Sbjct: 58 RGFSSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAER 203
BLAST of CF831961 vs. ExPASy Swiss-Prot
Match: UCRI_YEAST (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saccharomyces cerevisiae GN=RIP1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.156e-17 Identity = 44/94 (46.81%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 400 RAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFITRRTEEDIKLANSVDLGSLRDPQQDAER 681 R++AYF++ + ++ + + F+ SM+A+ DVLAMA +EV+L++I G V VKW+GKPVFI RT +I+ ANSVD+ +L+DPQ DA+R Sbjct: 53 RSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADR 146
BLAST of CF831961 vs. ExPASy Swiss-Prot
Match: UCRI_NEUCR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora crassa GN=NCU06606 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17 Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 406 FAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFITRRTEEDIKLANSVDLGSLRDPQQDAER 681 F+YF++ + A+ + I +F+ +MSAS DVLAMA +EVDL++I G V +KWRGKPVFI RT +I+ AN V++ +LRDP+ DA+R Sbjct: 70 FSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADR 161
BLAST of CF831961 vs. ExPASy Swiss-Prot
Match: UCRI_SCHPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Schizosaccharomyces pombe GN=rip1 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.278e-16 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 1 Query: 385 GDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFITRRTEEDIKLANSVDLGSLRDPQQDAER 681 GD S R +Y ++ + A+ + + F+ S SAS DVLAM+ EVDLS I G + VKW+GKPVFI RT E+I+ ANSVD+ +LRDPQ D++R Sbjct: 62 GDRS-RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDR 159 The following BLAST results are available for this feature:
BLAST of CF831961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831961 ID=CF831961; Name=CF831961; organism=Citrus sinensis; type=EST; length=682bpback to top |