CF831977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_THEAC (50S ribosomal protein L14P OS=Thermoplasma acidophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.319e-26 Identity = 52/101 (51.49%), Postives = 75/101 (74.26%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P+ A + CADNTGA+++ +I VK G+ R+P+A VGDM MA+VKKG P++R KV+ +V++RQ +P+ R DG + FEDNA V+V P GE++GS I GP+ Sbjct: 13 PLGANITCADNTGARSISLIDVKAWHGKARRIPAAGVGDMFMASVKKGTPEMRSKVVYAVVIRQKRPYRRPDGTMVQFEDNAAVLVTPDGEVRGSEIKGPV 113 HSP 2 Score: 23.8682 bits (50), Expect = 5.319e-26 Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = -2 Query: 109 KECGDLWPRIASAANAIV 162 +E + WPRIA+ A+ IV Sbjct: 115 REAAERWPRIAAIASIIV 132
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_THEVO (50S ribosomal protein L14P OS=Thermoplasma volcanium GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.588e-25 Identity = 51/101 (50.50%), Postives = 75/101 (74.26%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P+ A + CADNTGA+++ +I VK G+ R+P+A VGDM +A+VKKG P++R KV+ +V++RQ +P+ R DG + FEDNA V+V P GE++GS I GP+ Sbjct: 13 PLGANIVCADNTGARSISLIDVKAYHGKARRIPAAGVGDMFIASVKKGTPEMRSKVVYAVVIRQKRPYRRPDGTMVEFEDNAAVLVTPDGEVRGSEIKGPV 113 HSP 2 Score: 23.8682 bits (50), Expect = 2.588e-25 Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = -2 Query: 109 KECGDLWPRIASAANAIV 162 +E + WPRIA+ A+ IV Sbjct: 115 REAAERWPRIAAIASIIV 132
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL23_ENCCU (60S ribosomal protein L23 OS=Encephalitozoon cuniculi GN=RPL23 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.371e-25 Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = -1 Query: 167 VAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 466 V + CADN+GAK L I VK GRL RLP+A GD+ + +VKKGKP+LRKKV ++++RQ K W R DG + FEDNA V++N KGE++G+ I GP+ Sbjct: 28 VETLMKCADNSGAKILRCIGVKRYRGRLNRLPAAAPGDICVVSVKKGKPELRKKVHYAILIRQKKIWRRTDGSHIMFEDNAAVLINNKGELRGAQIAGPV 127 HSP 2 Score: 24.6386 bits (52), Expect = 7.371e-25 Identity = 8/17 (47.06%), Postives = 14/17 (82.35%), Query Frame = -2 Query: 112 KECGDLWPRIASAANAI 162 +E D+WP+I+S A++I Sbjct: 129 REVADMWPKISSQASSI 145
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METS3 (50S ribosomal protein L14P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl14p PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.775e-24 Identity = 51/101 (50.50%), Postives = 74/101 (73.27%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P+ AT+ C DNTGA+ + IISVKG G RL A VGD+V+A+VKKG D+R++V+ +V++RQ K + R DG+ + FEDNA VI+ P+G ++GS + GP+ Sbjct: 13 PIGATLQCVDNTGAREIQIISVKGFKGVRRRLDVAGVGDLVVASVKKGTADMRREVVNAVVIRQKKEYMRADGLRVKFEDNAAVIITPEGILKGSEVRGPV 113 HSP 2 Score: 24.6386 bits (52), Expect = 2.775e-24 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = -2 Query: 109 KECGDLWPRIASAANAIV 162 KE D WP + SAA+ +V Sbjct: 115 KEAADRWPSVGSAASILV 132
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METKA (50S ribosomal protein L14P OS=Methanopyrus kandleri GN=rpl14p PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.788e-24 Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A + CADNTGA+ L II+VKG G RLP+A +GDMV+ +VK+G PD+RK+V+ +VIVRQ K + R DG + FEDNA VIV P G +GS I GP+ Sbjct: 14 PVGARLVCADNTGARELQIIAVKGYKGVRRRLPNAGIGDMVVCSVKEGTPDMRKEVVNAVIVRQRKEYRRPDGTRVKFEDNAAVIVTPDGAPRGSEIRGPV 114
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METM7 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl14p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.642e-24 Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P A + CADNTGAK L II+VK TG + RLP+ VG MV +VKKG P++RK+V+P++I+RQ K + R DG + FEDNA VIV P+G +GS I GP+ Sbjct: 13 PNGARLVCADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METM6 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl14p PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 4.756e-24 Identity = 54/101 (53.47%), Postives = 72/101 (71.29%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P A + CADNTGAK L +I+VK TG + RLP+ VG MV +VKKG P++RK+V+P++I+RQ K + R DG + FEDNA VIV P+G +GS I GP+ Sbjct: 13 PNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METTH (50S ribosomal protein L14P OS=Methanobacterium thermoautotrophicum GN=rpl14p PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.117e-24 Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A + C DNTGA+ + IISV+G G RL +A VGDMV+ +VKKG D+R++V+ +VIVRQ K + R DG+ + FEDNA VIV+P+G ++GS I GP+ Sbjct: 13 PVGARLQCVDNTGAREVEIISVRGYKGVRRRLAAAGVGDMVVVSVKKGTVDMRREVLNAVIVRQKKEYRRPDGLRVKFEDNAAVIVSPEGVLKGSEIRGPV 113 HSP 2 Score: 25.409 bits (54), Expect = 6.117e-24 Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = -2 Query: 109 KECGDLWPRIASAANAIV 162 KE D WP + SAA+ IV Sbjct: 115 KEAADRWPSVGSAASIIV 132
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METVS (50S ribosomal protein L14P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl14p PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.212e-24 Identity = 54/101 (53.47%), Postives = 73/101 (72.28%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P A + CADNTGAK L +I+VK +G + RLPSA VG +V +VKKG P++RK+V+P++I+RQ K + R DG + FEDNA VIV P+G +GS I GP+ Sbjct: 13 PNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METVA (50S ribosomal protein L14P OS=Methanococcus vannielii GN=rpl14p PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.212e-24 Identity = 54/101 (53.47%), Postives = 73/101 (72.28%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P A + CADNTGAK L +I+VK +G + RLPSA VG +V +VKKG P++RK+V+P++I+RQ K + R DG + FEDNA VIV P+G +GS I GP+ Sbjct: 13 PNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPV 113 The following BLAST results are available for this feature:
BLAST of CF831977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831977 ID=CF831977; Name=CF831977; organism=Citrus sinensis; type=EST; length=469bpback to top |