CF831977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_CALMQ (50S ribosomal protein L14P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl14p PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 4.607e-19 Identity = 43/98 (43.88%), Postives = 72/98 (73.47%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLI--RLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 VN ADN+GAK + +I V G + + R+P VGDMV+ +V++GKP++RK+++ +++VRQ +P+ R DG ++ FEDNA VIV +G+++G+ + GP+ Sbjct: 28 VNVADNSGAKVVKVIGVVGHYSKNVHRRIPGVSVGDMVVVSVQEGKPEMRKQILRAIVVRQRRPFRRPDGTWVAFEDNAVVIVTEEGQVKGTEVHGPV 125
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METBF (50S ribosomal protein L14P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl14p PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.858e-19 Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = -1 Query: 167 ATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 460 A V C DNTGAK + IISVK G R+P A +GDM + +VKKG P++RK+V+ +V+VRQ + + R DG+ + FEDNA VI + +G +G+ I GPI Sbjct: 16 AKVPCVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLRVSFEDNAMVITDEEGIPKGTDIKGPI 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METAC (50S ribosomal protein L14P OS=Methanosarcina acetivorans GN=rpl14p PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.858e-19 Identity = 47/98 (47.96%), Postives = 68/98 (69.39%), Query Frame = -1 Query: 167 ATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 460 A + C DNTGAK + IISVK G R+P A +GDM + +VKKG P++RK+V+ +V+VRQ + + R DG+ + FEDNA VI + +G +G+ I GP+ Sbjct: 16 AQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEEGIPKGTDIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_HALWD (50S ribosomal protein L14P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl14p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.340e-18 Identity = 48/96 (50.00%), Postives = 64/96 (66.67%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 V CADNTGA+ L +ISV G +G R P A +GD V +V KG P++R++V+ +VIVRQ K R DG + FEDNA VI++ E +G+ I GPI Sbjct: 18 VTCADNTGARELKVISVMGSSGTKNRHPKAGIGDQVTVSVTKGTPEMRRQVLEAVIVRQRKSIRRPDGTRVKFEDNAAVIIDEMEEPRGTEIKGPI 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_HALMA (50S ribosomal protein L14P OS=Haloarcula marismortui GN=rpl14p PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.340e-18 Identity = 45/96 (46.88%), Postives = 65/96 (67.71%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 + CADNTGA+ L +ISV G +G R P A +GD + +V KG P++R++V+ +V+VRQ KP R DG + FEDNA VIV+ + +G+ + GPI Sbjct: 18 ITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPI 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_HALLT (50S ribosomal protein L14P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl14p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.340e-18 Identity = 45/96 (46.88%), Postives = 65/96 (67.71%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 + CADNTGA+ L +ISV G +G R P A +GD V +V KG P++R++V+ +V+VRQ KP R +G + FEDNA VI++ E +G+ I GP+ Sbjct: 18 ITCADNTGARELKVISVAGYSGTKNRHPKAGIGDKVTVSVTKGTPEMRRQVLEAVVVRQRKPIRRPNGTRVKFEDNAAVIIDDLDEPRGTEIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_THEPD (50S ribosomal protein L14P OS=Thermofilum pendens (strain Hrk 5) GN=rpl14p PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.751e-18 Identity = 43/96 (44.79%), Postives = 66/96 (68.75%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 V ADN+GA +I V R+P A VGD+V+ +++ GKP+LRK+VM ++++RQ +P+ R DG ++ FEDNA VI+ P+GE +G+ I GP+ Sbjct: 27 VKVADNSGATLAKVIGVPHYKAVWRRIPGAAVGDIVIVSIRAGKPELRKQVMRAIVIRQRRPYRRPDGSWIAFEDNAVVIITPEGEPKGTEIRGPL 122
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METMA (50S ribosomal protein L14P OS=Methanosarcina mazei GN=rpl14p PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.751e-18 Identity = 46/98 (46.94%), Postives = 67/98 (68.37%), Query Frame = -1 Query: 167 ATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 460 A + C DNTGAK + IISVK G R+P A +GDM + +VKKG P++RK+++ +V+VRQ + + R DG+ + FEDNA VI + G +G+ I GP+ Sbjct: 16 AQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEDGIPKGTDIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_NATPD (50S ribosomal protein L14P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl14p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.652e-18 Identity = 42/96 (43.75%), Postives = 64/96 (66.67%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 + CADNTGA+ L + S+ G +G R P A +GD + +V KG P++R++V+ +V++RQ KP R DG + FEDNA VIV+ + +G+ + GPI Sbjct: 18 ITCADNTGARELKVTSISGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVIRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPI 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METB6 (50S ribosomal protein L14P OS=Methanoregula boonei (strain 6A8) GN=rpl14p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 8.688e-18 Identity = 44/96 (45.83%), Postives = 65/96 (67.71%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 + CADNTGA+ + I+SV G G R P +GD+ TVKKG PD+RKK++ +V++RQ K R +G+ + F+DNA V+V+ K E +G+ I GP+ Sbjct: 18 LTCADNTGARIVQIVSVFGYHGVRRRQPKMGLGDIATVTVKKGTPDMRKKLVRAVVIRQKKEMRRPNGLRVSFDDNAVVVVDEKNEPKGTEIKGPV 113 The following BLAST results are available for this feature:
BLAST of CF831977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831977 ID=CF831977; Name=CF831977; organism=Citrus sinensis; type=EST; length=469bpback to top |