CF831977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METLZ (50S ribosomal protein L14P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl14p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.312e-17 Identity = 41/94 (43.62%), Postives = 65/94 (69.15%), Query Frame = -1 Query: 167 CADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 448 CADNTGA+ + I+SV G G R P +GD+ TVKKG PD+++K++ +V+VRQ K + R +G+ + FE+NA +++N G+ +G+ I GP+ Sbjct: 20 CADNTGARVVQIVSVFGYHGVKNRQPKMGLGDLATVTVKKGTPDMKRKLVRAVVVRQKKEFRRPNGLRVSFEENAMILLNENGDPRGTDIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_UNCMA (50S ribosomal protein L14P OS=Uncultured methanogenic archaeon RC-I GN=rpl14p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.140e-16 Identity = 41/99 (41.41%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 167 AATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 463 A + ADNTGA+ + +ISV GR R+P A +GD+ + +VKKG P++RK ++ V++RQ K + R G+ + FEDNA V+V+ + +G+ I GP+ Sbjct: 15 ATRLEVADNTGARLVEVISVLKYRGRKNRMPKAGIGDIFIGSVKKGTPEMRKTIVRCVVIRQKKEYRRPSGLRVSFEDNACVLVDDNNDPKGTEIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_NANEQ (50S ribosomal protein L14P OS=Nanoarchaeum equitans GN=rpl14p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.140e-16 Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNA-GVIVNPKGEMQGSAITGPI 469 PV A +N ADN+GAK + +I+VKG GR RL A + D+V+ +V+ GKPD+ ++ +V+VR K W R+DG + FEDNA ++ + G +G+ I PI Sbjct: 13 PVGAYLNVADNSGAKVVKLIAVKGYKGRKRRLAKAGIADLVIVSVRDGKPDMIGQIFKAVVVRMKKEWRRRDGTRIKFEDNAVALLKDDYGTPKGTIIKTPI 114
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METHJ (50S ribosomal protein L14P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl14p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.140e-16 Identity = 41/96 (42.71%), Postives = 63/96 (65.62%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 + CADNTGA+ + ++SV G G R P + D+ +VKKG PD+R+K++ +V++RQ K R G+ + FEDNA V+V+ K E +G+ I GP+ Sbjct: 18 LTCADNTGARVVQVVSVFGYHGVRRRQPKLGLADIATVSVKKGTPDMRRKLVRAVVIRQKKEIRRPSGLRLSFEDNAVVVVDDKNEPRGTEIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METMJ (50S ribosomal protein L14P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.812e-15 Identity = 39/94 (41.49%), Postives = 62/94 (65.96%), Query Frame = -1 Query: 167 CADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 448 C+DNTGA+ + ++SV G R P +GD+ +VKKG PD+R+K+ +V++RQ K R +G+ + FEDNA V++N +GE +G+ I G + Sbjct: 20 CSDNTGARLVEVVSVDRYHGVRRRQPCLGLGDVATVSVKKGTPDMRRKLEKAVVIRQKKEIRRPNGIRLSFEDNAMVLINERGEPKGTEIKGAV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_DEHE1 (50S ribosomal protein L14 OS=Dehalococcoides ethenogenes (strain 195) GN=rplN PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.090e-15 Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADNTGAK + I+V G + +L A VGD+++A VKK PD + K V+ +V+VR KP+ R DG ++ F+DNA VI+N K E +G+ I GP+ Sbjct: 8 LNVADNTGAKKIMCINVLGGSRKL----QAKVGDVIVAAVKKSSPDAQAKSGTVVKAVVVRITKPYARPDGSYIKFDDNAAVILNDKMEPKGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_DEHSC (50S ribosomal protein L14 OS=Dehalococcoides sp. (strain CBDB1) GN=rplN PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.271e-15 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADNTGAK + I+V G + ++ A VGD+++A VKK PD + K V+ +V+VR KP+ R DG ++ F+DNA VI+N K E +G+ I GP+ Sbjct: 8 LNVADNTGAKKIMCINVLGGSHKI----QAKVGDVIVAAVKKSSPDAQAKSGTVVKAVVVRITKPYARPDGSYIKFDDNAAVILNDKMEPKGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_DEHSB (50S ribosomal protein L14 OS=Dehalococcoides sp. (strain BAV1) GN=rplN PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.271e-15 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADNTGAK + I+V G + ++ A VGD+++A VKK PD + K V+ +V+VR KP+ R DG ++ F+DNA VI+N K E +G+ I GP+ Sbjct: 8 LNVADNTGAKKIMCINVLGGSHKI----QAKVGDVIVAAVKKSSPDAQAKSGTVVKAVVVRITKPYARPDGSYIKFDDNAAVILNDKMEPKGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_PHYPA (50S ribosomal protein L14, chloroplastic OS=Physcomitrella patens GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.443e-13 Identity = 37/99 (37.37%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I + G + R A +GD+++A VK+ P++ + +V+ +V+VR CK RK+G + F+DNA VI+N +G +G+ + GP+ Sbjct: 8 LNVADNSGARKLMCIQILGASNRKY----AHIGDIIIAVVKEAIPNMPLKKSEVVRAVVVRTCKELKRKNGTIIQFDDNAAVIINQEGNPKGTRVFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_STAPU (50S ribosomal protein L14, chloroplastic OS=Staurastrum punctulatum GN=rpl14 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 8.415e-13 Identity = 39/99 (39.39%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I V G + R A +GDM++A VK+ P++ + +V+ +VIVR CK R +G+ + F+DNA V+VN +G +G+ + GP+ Sbjct: 8 LNVADNSGARRLMCIRVLGSSNRKY----ANIGDMIIAVVKEAVPNMPLKKSEVVRAVIVRTCKGIKRNNGMILRFDDNAAVVVNQEGNPRGTRVFGPV 102 The following BLAST results are available for this feature:
BLAST of CF831977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831977 ID=CF831977; Name=CF831977; organism=Citrus sinensis; type=EST; length=469bpback to top |